Haloferax alexandrinus: G3A49_16275
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Entry
G3A49_16275 CDS
T06450
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hale
Haloferax alexandrinus
Brite
KEGG Orthology (KO) [BR:
hale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hale03400
]
G3A49_16275
DNA repair and recombination proteins [BR:
hale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G3A49_16275
Archaeal homologous recombinant proteins
G3A49_16275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
ABC_tran
AAA_13
SbcC_Walker_B
MscS_porin
AAA_29
AAA_21
Rad50_zn_hook
BLOC1_2
AAA_25
NPV_P10
Recep_L_domain
EXOC6_Sec15_N
Motif
Other DBs
NCBI-ProteinID:
QIB79571
UniProt:
A0A6C0UYT0
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Position
3295724..3298435
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AA seq
903 aa
AA seq
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MKITEVALEDIKSYEGRTVVPIEGGVTAILGENGAGKSTIQEAIGFALFDSLPFNNKDFV
REGASSGTVEVTFEQDTSEGRQRFRVTRSAGRSNYGVHRYDAENDEWIDQDIDSKSQLVK
WLCAQFDVEDKDELQSLWESCIGVPQTRFLSDFAQRPASRKATFDALLNLDAYEESWNRL
KDIPDAIGREEQKLREEIAGLTSTVQDLPDERAKAESLADEVEAIEAKIDRKSDELAEKE
SEREELEAVQDEIDSLEQEVRSQEQEIEATEGELETAEQELRAAQKAQEKCEENREGYQR
HEEASERLDELEERESERDALAEQKAEQKREVSSVEFEVNQLEDDVETLQSAQETLEERE
DEKQRYEELDEKINSLQQREGEVEELQDQIDEFARDIAEKQEKVESLEAKVEAIEEEWEA
TTHPEELDDEINQRKARRQQLQNERERLEEQLERLRDTDVDAPCPTCDRPLKEEHRSDAI
DQREERIEAIATERAELSEELSDLRDRREEARDVKRRADKLPVHREKIESLEAEIEGLQA
EKSETEETLEDLEGELAELPELEAEREELQEAYDEYETAEFRVQEHADVPDELEEKRAEL
EAANSQLQEITDELAEYEGLDEKLSEVKETLEETESAHQTYIEHKQQASQVEERQQAVDE
TEAELAELKEALDETEAELEETRAAFDEERLQTLESDIDDLKGEIQRAKGSLGEKKESLR
EARGEIERLEAKLEMRQETLQQLKELKADQQFADWVRENVREAGPKMREIITDRIGARAN
ELFRTIRGASAETLEWTSDYEIVVHDADVTKSFSTLSGGEKMAAALAVRLAILEQLASVG
VAFLDEPTANLDREKKRNLVSQLKQLDSFEQLTVISHDETFDSMTDYTISVTKDRQTSEV
TVN
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaccgaggttgcgttggaggacatcaagtcatacgagggacggacagtcgtg
ccaattgagggtggtgtgacggcgattctcggtgagaacggcgcagggaaatcgacgatt
caggaagcgattggcttcgcgctgttcgattcgctgccgttcaacaacaaggacttcgtg
cgcgagggcgcgagctccggaactgtcgaggtcacctttgaacaagatacctcggaaggc
cggcagcgcttccgcgtgacgcggtccgctggtcggtcgaattacggtgtgcaccgctac
gatgccgagaacgacgagtggattgaccaggacatcgattccaaatcccagctcgtcaag
tggttgtgcgctcagttcgacgtcgaagacaaagacgaactgcagagcctgtgggaatcg
tgcattggcgttccgcagacgcggttcctctctgacttcgcgcagcgacccgccagtcgg
aaagcgacgttcgatgcgctgctgaacctcgacgcgtacgaagagtcctggaatcgtctc
aaggacattccggacgcgattggacgggaggagcagaagctccgtgaggagatagcaggg
ctcacaagtacggtgcaggacctgccagacgagcgggcgaaagcggaatcgctggctgac
gaggtcgaagccatcgaggcgaagatcgaccggaagtccgacgagctggctgagaaagaa
tcggagcgtgaagagttagaggctgtccaagatgaaatcgacagtctcgaacaggaagtc
cggtcacaggagcaagagatcgaggcgaccgagggagagctggaaactgctgagcaggag
cttcgagccgctcagaaggcacaggaaaagtgtgaggagaaccgtgagggctatcagcgg
cacgaggaagcgagcgagcggctggacgagctagaggaacgagagagcgaacgagacgcg
cttgctgagcagaaagctgaacagaaacgagaggtctcgtcggtcgaattcgaggtgaac
cagctcgaagacgacgtagagacgctgcaatcggcccaagagacgctagaagagcgcgag
gacgagaaacagcgatacgaagaacttgacgagaagatcaactcgctacagcaacgtgag
ggcgaggtcgaggaactgcaggaccaaatcgacgagttcgccagggacatcgccgagaag
caagagaaggttgagtcgctcgaagcgaaagtcgaggccatcgaggaagagtgggaggcg
acgacgcatccggaagaactcgacgacgagattaaccagcggaaggcgcgtcgacagcaa
ctgcagaacgaacgggaacggctcgaagaacagttggaacggttacgagatacggatgtg
gatgcgccgtgtccaacgtgtgaccggcccctgaaggaagaacaccggtcggacgcaatc
gaccagcgcgaagagcggatcgaagccatcgccacagaacgtgcggagctcagcgaggaa
ctctccgatctgcgtgaccgtcgggaggaagcgcgagacgtcaagcgccgcgccgacaag
ctcccggttcaccgtgagaagatcgagtcgttggaagcagagatcgagggcctccaagca
gagaagtcggagacggaggagacgcttgaggacctcgaaggggaactggcggaactgcct
gagctcgaagcagagcgagaggaactgcaggaagcgtatgacgaatacgagactgcggag
ttccgagtgcaggagcacgcggacgtccctgacgaattagaggagaagcgcgcagagctt
gaggctgccaactcgcagttgcaggaaatcaccgacgagttggctgaatacgaagggctg
gacgagaaactgtctgaggtcaaagagacactggaggagaccgagtcggcgcatcagacg
tacatcgagcacaagcaacaggcgtctcaggtagaggaacggcaacaggccgttgacgag
acggaagcggaactggccgagctcaaagaggctctcgacgagacggaagccgaactcgaa
gagacgagagcagcgttcgacgaggagcggcttcagacgcttgagtcggacatcgatgac
ctcaaaggcgagatacagcgggcgaaaggatccctgggtgagaagaaagagagcctccgc
gaggcacgcggggagatcgagcgtctggaggcgaagttagagatgcggcaggagacgctc
caacagttgaaggagctgaaagctgatcagcagttcgcggactgggtccgggagaacgtt
cgggaggccgggccgaagatgcgagaaatcatcaccgaccggatcggggcgcgggccaac
gagttgttccggacgatccgcggtgcgtctgccgagacgcttgagtggacaagcgactac
gagatcgtcgttcacgacgcggacgtgacgaaatcgttctcgacgctgagcggcggtgag
aagatggcagccgcgctcgccgtacgactcgctatcctcgaacaactcgcgtccgtcggt
gtcgcgttcctggacgaaccgacggcgaacctcgaccgggagaagaaacgaaacctggtc
tcgcagctgaagcaactggatagtttcgagcagctcaccgtcatcagtcacgacgagacg
ttcgattcgatgacggactacaccatctcggtgacgaaagaccggcagacgtcggaggtg
acggtgaattaa
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