KEGG   Haloferax volcanii wsp1: G3A49_17955
Entry
G3A49_17955       CDS       T06450                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hale  Haloferax volcanii wsp1
Pathway
hale03030  DNA replication
hale03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hale00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G3A49_17955 (fen)
   03410 Base excision repair
    G3A49_17955 (fen)
   03450 Non-homologous end-joining
    G3A49_17955 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hale03032]
    G3A49_17955 (fen)
   03400 DNA repair and recombination proteins [BR:hale03400]
    G3A49_17955 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hale04147]
    G3A49_17955 (fen)
DNA replication proteins [BR:hale03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    G3A49_17955 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     G3A49_17955 (fen)
DNA repair and recombination proteins [BR:hale03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     G3A49_17955 (fen)
Exosome [BR:hale04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   G3A49_17955 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-ProteinID: QIB79878
UniProt: A0A6C0V3M1
LinkDB
Position
complement(3601914..3602894)
AA seq 326 aa
MGNADLRTLAALSEVSFDEVSGSVVAVDAHNWLYRYLTTTVKWTSSETYTTSEGEEVANL
VGIVQGLPKFFEHDLTPVFVFDGGVTEMKDDEVAKRREQREKAEERLEAAREAGDAAEAA
RMEARTQRLTETIQDTSRELLSLFDVPVVEAPAEGEAQASYMARTGDADYVGSEDYDTLL
FGAPYTLRQLTSKGNPELMDLDATLDKHDITHEQLVDIAMLCGTDFNEGITGIGPKTAVK
LVTEHGDLWSVLEARGDTIPNADRVREFFLDPPVTDDYDYDTDIDPDVAAAREFVTETWE
VDPEEVRRGFERIEESVTQTGLDRWT
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggaaacgcagacctgcggacgctcgccgcgctctccgaggtgtcgttcgacgaggtg
tccgggagcgtcgtcgccgtcgacgcccacaactggctgtaccgctatctcacgacgacg
gtcaagtggacgagttcggagacgtacacgacgagcgagggcgaggaggtcgccaacctc
gtcggcatcgtccagggactccccaagttcttcgaacacgacctgacgcccgtcttcgtc
ttcgacggcggcgtcaccgagatgaaagacgacgaggtggccaagcgccgcgagcagcgc
gagaaggccgaagaacgcctcgaagcggcgcgtgaggcgggcgacgcggccgaggccgcc
cggatggaagcccggacccagcggctcaccgagacgattcaggacaccagtcgcgaactc
ctctcgcttttcgacgtgccggtggtcgaagcgcccgccgagggcgaggcgcaggcgtcc
tacatggcccgcacgggcgatgccgactacgtggggagcgaggactacgacacgctcttg
ttcggcgcaccctacacgctccgacagctcacgagcaaggggaaccccgaactgatggac
ctcgacgcgacgctcgacaaacacgacatcacccacgagcaactcgtcgacatcgccatg
ctctgcgggaccgactttaacgagggtatcacgggaatcggcccgaaaacggccgtgaag
ctcgtcacggaacacggcgacctctggtcggtcctcgaagcccgcggcgacaccatcccc
aacgccgaccgggtgcgcgagttcttcttggacccgccggtcaccgacgactacgactac
gacaccgacatcgaccccgacgtggccgccgcccgcgagttcgtcaccgagacgtgggag
gtcgaccccgaggaggtccgccgcggcttcgagcgcatcgaggagtcggtcacgcagacc
ggtctcgaccgctggacgtaa

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