Halomonas alkaliantarctica: QEN58_00595
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Entry
QEN58_00595 CDS
T09033
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
half
Halomonas alkaliantarctica
Brite
KEGG Orthology (KO) [BR:
half00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
half03400
]
QEN58_00595 (phrB)
Enzymes [BR:
half01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
QEN58_00595 (phrB)
DNA repair and recombination proteins [BR:
half03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
QEN58_00595 (phrB)
Prokaryotic type
QEN58_00595 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WGI25588
UniProt:
A0ABY8LMC2
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All DBs
Position
complement(126560..127972)
Genome browser
AA seq
470 aa
AA seq
DB search
MKRQLVWLRSDLRIDDNSALAAAAAKGPVIAVFLRSIPQWQAHGHGANKLDFWARGVAGV
KTALNGLNIPLLHRDIERYDQAPEALLDIAREYDIEQLHFNYEYALNERHRDQAVQDAFK
QAGIAAHGYHDAVAFAPGSLLTGKGDYYGVFTPFSKAWHKQVSAEQLALRPTPKVQAALD
IQSDSLPELPTLDSSPIDGRLWPAGENAAADNLARFLRFRGRHYNAQRDLPKVRGTSELS
PYLALGMISHRQCLQAVMAENGGDLADGDIGLTTWVNELVWREFYQHVAVGFPQVCRYQP
FQEHTKQLAWRDDDEGFQAWCEGRTGYPIVDAAMRQLVATGWMHNRLRMITAMFLSKHLL
IDWRRGEAFFMRHLVDGEFCANNGGWQWAASTGTDAAPYFRIFNPTTQSTRFDAEGEFIA
LWLPELAKLPAKARHAPQQDLLTDVDYPAPIVDHKAARQRALEAFKSLSK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcagttggtttggctgcgcagcgatctgcgcattgacgacaacagcgccctc
gccgccgctgcggctaagggccctgtgatagcggtatttttgcgcagcattccccagtgg
caagcgcatggccacggcgccaataagctggatttttgggcgcggggtgtggctggcgtt
aaaacagcgctcaacggtttgaatatcccactactgcatcgcgatattgaacgctatgac
caggcacccgaggcgctgctcgatatcgctcgtgagtacgatattgagcagttgcacttc
aattatgagtacgcgctcaatgagcgccaccgcgatcaggctgtgcaagacgcctttaaa
caggctggtattgccgctcatggctaccacgacgctgtagcatttgcccccggcagcctg
ctaaccggcaaaggcgactattacggggtatttacgccgttctccaaggcgtggcacaag
caggtcagcgccgaacagttggcgctgcgcccgacgccaaaggtgcaagcggcgctggat
attcaaagcgactcgctgcctgaactgcctacgcttgatagctcccctattgatggacgg
ctatggcctgccggtgaaaatgccgcagcggataacttggcgcgctttctgcgcttccgt
ggccgacactataacgctcagcgtgacctacctaaggtacgcggaaccagcgaactatcg
ccctatctggcgctcggcatgatctcccatcgccagtgtttacaagccgtgatggctgag
aacggcggggacttagccgatggcgatatcggccttacaacctgggtcaacgagctggtc
tggcgggaattttatcaacacgtagcggtgggttttcctcaagtgtgtcgctaccaaccc
tttcaagaacacactaagcagttagcgtggcgcgatgatgacgaaggctttcaagcttgg
tgcgaggggcgaacgggctaccccattgttgatgctgccatgcgacagttagtggcaact
ggctggatgcataaccggctgcgcatgatcacggcaatgtttttaagtaagcacctgctg
attgattggcgccgtggcgaagccttttttatgcgtcacctagttgacggcgaattctgc
gccaacaacggcggctggcagtgggcagcctcaacgggtactgatgccgccccttacttt
cgcatttttaatccaaccacccaatccactcgctttgatgctgaaggtgagtttattgct
ctctggctgcctgagctggccaaattgcccgctaaagcgcgccatgcgccgcagcaagat
ctactcaccgatgtcgactacccagcgcctattgtcgaccacaaagcggcacgccagcgc
gccttagaggcgtttaaatcgctatctaaataa
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