Vreelandella neptunia MSP3: QEN58_00615
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Entry
QEN58_00615 CDS
T09033
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
half
Vreelandella neptunia MSP3
Brite
KEGG Orthology (KO) [BR:
half00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
half03021
]
QEN58_00615 (rapA)
Transcription machinery [BR:
half03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
QEN58_00615 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
ResIII
SNF2-rel_dom
DEAD
YGR130C_N
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
WGI25591
UniProt:
A0ABY8LMD5
LinkDB
All DBs
Position
complement(131304..134249)
Genome browser
AA seq
981 aa
AA seq
DB search
MSDFSPGQRWISDGEAELGLGTVLNCDARSVTILFSASQETRTYNTRQAPLTRVMFGSGD
RVLSADGWQIVVDDSKESGGLITYIGEDKEGNLRELPEAKLADTMQFDQARDRLLTGQVD
RNDWFDLRFRTLHHYQRIEQHSALGFSGPRIDLIPHQLYISNEVANRHAPRVLLADEVGL
GKTIEAGLILHRLLLNGRVERALILVPDSLTHQWLVELLRRFSLNVTLLDETQSQAHGSY
NPFESAQLVLASQGWLFANPQRQEQALASQFDLLIVDEAHHLDWSEEGSGPGYQCVEQLS
AVIPGLLLLTATPEQMGIKSHFARLRLLDSERYHDLERFKAEESHYTEVARAIDALEALP
DDPSARAHVSAVADDRDSQALLGILCNPEASQAQQDAARAQLSEALLDRHGTGRVMFRNS
RRHVGGFPERRLNLAPLALPSAYRRVVRRLERDDDYLDELLIETGMDHPDVLIYPDAAYR
ELSNDPLNGEDWWHIDPRVNWLLEKLSDDSESGFANEKVLVIAHHRETAEGLAEGLRVLG
GYHAPVFHEDLSLIERDRAAAAFADEDEGVQVLVCSEIGSEGRNFQFCRHLVMFDMPQHP
DQLEQRIGRLDRIGQRHAIELHIPTFEGSPGERLLRWYHEGMDAFSAPHGVGNELFDTFG
DALADALLDDEALNEIIAETRAMFSAKLAEHDAGRNRLLELNACRPARAQQVIDAVRELD
DDAALPRYLERALDIFGVESQEIGKGLMHLQPSQHMLDGLPGLVKGEEGFTATYSRSQAL
ARDDVQRLSWEHPLLREMMGRVLDGTMGNSALALLRHDAIPSGRLMAELVFRTHCPAPKK
LHLNRFLPPTAVRLLLDESGANLTSKISFTGLGKNLQKVNKSLARDLIKSRHDQLRELLT
QGEGEAERQLPSIVENAEARMRAQLDAEIARLTALAEHNPAVRSAEIDALKDERKALSEA
IENTRLRLDSVRVIITVDADR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttttctcccggccaacgctggattagcgacggtgaagctgagcttgggctc
ggcaccgtgcttaactgcgacgcccgtagcgttaccattttgttcagtgccagtcaggaa
acccgtacctacaatacccgccaggccccgctgacccgcgttatgttcggcagcggtgac
cgcgtactctccgctgacggctggcagatcgttgtcgatgacagcaaagagtcaggtggc
ctgatcacctacatcggtgaagataaggaaggcaatcttcgcgagctgcccgaggccaaa
ctcgccgacaccatgcagttcgaccaggctcgcgaccgcctgctgaccggtcaggtcgat
cgcaacgactggtttgatttgcgctttcgtaccctgcaccactatcaacgtatcgagcag
cacagcgcgctgggcttttccgggccgcgcatcgacctgattccccatcagctctacatc
tccaatgaagttgccaaccgccatgcgccccgcgtactgctggcggacgaagtgggcctg
ggtaaaaccattgaagctggcctgattctgcaccgcctgctgctcaacggtcgtgttgaa
cgcgcgctaattctggtgcccgacagcctcacgcatcagtggttggtcgagttactgcga
cgcttctcgctcaacgtcacgctgttagatgaaacccaaagccaggctcacggcagctac
aacccttttgagagcgcccaactggtgttagcgagccagggttggctatttgccaaccct
cagcgtcaggagcaggcgctggccagtcagttcgacctgctgatcgtcgacgaagcgcac
cacctcgactggagtgaagaaggcagcggccccggttaccaatgtgtcgaacagctttcg
gcggtgattcccggcctgctgctgctcaccgcaacccccgaacagatgggcatcaagagc
cacttcgcccgtctgcggttgctggacagcgagcgctaccacgatcttgagcgcttcaag
gccgaagagagccactataccgaggtggcccgcgccattgacgctctcgaagcgctacct
gacgatcccagcgcacgtgcccacgtctctgcggtagccgatgaccgcgacagccaagcg
ctgctgggcatcctgtgcaacccggaggcgagccaagcgcagcaggacgccgctcgcgcc
caactgagcgaagcgctgctggatcgccacggtactggtcgggtgatgttccgcaatagc
cgccgtcatgtgggaggcttcccagaacggcgcctcaatttagcgccgctagcgctgcct
tcggcttatcgtcgcgttgtacgccgtcttgagcgcgacgatgattatctcgatgagttg
ctgatcgagaccggcatggatcaccccgacgtgctgatctaccccgacgcggcctaccgc
gagctcagtaatgacccgctcaacggcgaagactggtggcacatcgacccccgggttaac
tggctgctggaaaagctcagcgacgacagcgagagcggcttcgccaacgaaaaagtcctg
gtcattgcccaccaccgggagaccgccgaagggcttgctgaagggctgcgggtgctgggc
ggctaccacgcaccggtattccacgaagatctctccctgatagagcgtgaccgcgcagcg
gcggcgtttgccgatgaggatgaaggcgttcaggtgttggtctgctcagaaattggctcg
gaggggcgcaatttccagttctgccgccacctcgtcatgttcgatatgccccagcacccg
gatcagctcgaacagcgcatcggccgcctggatcgtatcggccagcgccacgccattgag
ctgcacattcccaccttcgaaggcagccccggcgagcgcctgctgcgctggtaccacgaa
ggtatggatgcgttcagtgccccacatggggtcggcaacgagctgtttgatacctttggc
gacgccctggctgacgccctgctggatgatgaggcacttaacgagatcatcgccgaaacc
cgtgcgatgtttagcgccaagctggcggaacacgatgcgggccgcaaccgactgcttgag
ctcaatgcttgccgccccgcccgtgctcagcaggtcatcgacgcggtgcgcgagcttgat
gacgacgccgccctgccgcgctacctggaacgggcgctggatattttcggcgtggaaagc
caggagatcggcaaaggcttaatgcacctgcagcccagccaacatatgctggatggcttg
ccgggtctggttaaaggcgaagagggctttaccgccacctacagccgatcccaggcgctg
gcccgtgacgatgtacagcggctctcctgggagcacccactactgcgggaaatgatgggc
cgcgtgctggatggcaccatgggcaactcggcgctcgctctgctgcgccacgatgccatt
cccagcggccgcttgatggccgaactcgtgttccgcacccactgcccggcgcccaagaag
ctgcaccttaaccgcttcttgccgcccaccgcggtgcgcttactgctggatgaatcaggc
gccaatctgaccagcaaaatctctttcaccggcttgggcaaaaacctgcagaaggttaac
aagtcgctggcacgggatttgatcaagagccgtcacgaccagttgcgtgaactgcttacc
cagggtgaaggcgaagccgagcgccagctgcccagcatcgtcgagaacgctgaagcgcgc
atgcgcgcccagctggacgccgagattgcgcgcttaacggcacttgccgagcacaatccg
gcggtgcgcagtgctgaaatcgacgcgttaaaagatgagcgcaaggcactcagcgaagcg
attgagaacacccgcctgcggctggattccgtgcgggtgattatcaccgttgatgctgac
cgctaa
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