Halomonas alkaliantarctica: QEN58_00900
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Entry
QEN58_00900 CDS
T09033
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
half
Halomonas alkaliantarctica
Pathway
half03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
half00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QEN58_00900 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
half03021
]
QEN58_00900 (rpoA)
03400 DNA repair and recombination proteins [BR:
half03400
]
QEN58_00900 (rpoA)
Enzymes [BR:
half01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QEN58_00900 (rpoA)
Transcription machinery [BR:
half03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QEN58_00900 (rpoA)
DNA repair and recombination proteins [BR:
half03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QEN58_00900 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Acyl-CoA-dh_C
Motif
Other DBs
NCBI-ProteinID:
WGI25643
LinkDB
All DBs
Position
180957..181952
Genome browser
AA seq
331 aa
AA seq
DB search
MQRSVTEFLRPRDIKVEEISAHHAKIVLEPFERGFGHTLGNALRRILLSSMPGCAVVEAE
IAGVEHEYSALEGVQEDVIEILLNLKDVAIKMHSRDEAVLTLNKQGPAVVTAGDIALDHS
VEIVNPDHVIAHVNEGAELKIQLKVALGRGYEPADARGSDEETRAIGRLQLDATFSPVRR
VSYSVEAARVEQRTDLDKLIIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQEV
EEEEDHVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLNE
IKDVLAARGLSLGMRLENWPPASLKDDKASA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgacagagtttctccgtcctcgcgacatcaaggtcgaagaaatcagc
gcacatcacgccaaaatcgtgctcgaaccgttcgagcgtggctttggtcacaccctgggg
aatgcactgcgccgcattctgctttcgtctatgcccggctgtgccgtggtagaggctgaa
attgccggtgttgagcatgaatacagtgcgctcgaaggggtgcaggaagatgtcattgaa
atcctcctgaacttgaaagatgttgcgatcaagatgcacagccgcgatgaggcggtgctc
acgctgaacaagcagggcccagccgtcgtcaccgctggcgacattgcgcttgatcatagc
gtcgaaatcgtcaacccggaccacgtcattgctcatgtcaatgaaggtgccgagctgaaa
attcagcttaaggtagcgctgggtcgtggctacgagccggctgacgcgcgcggctctgat
gaagagacacgtgccattggccgcctgcagctggatgccaccttcagccctgtccgccgt
gtttcctactcggttgaggctgctcgtgttgagcagcgcaccgatctcgataagctaatt
atcgatctggaaaccgacggtaccctggatccggaagaggctatccgtcgcagtgcgacc
atcctgcaagagcagctggccgccttcgtcgacctggaagctgataaagaacaggaagtc
gaagaggaagaggatcatgttgatccaattctattgcgccccgtagacgatcttgagttg
accgttcgtagcgcgaactgcctaaaagccgagaatatttattatatcggtgatcttatc
cagcgcacagaagtggagctgttgaagacaccgaatctcggtaaaaagtctttgaatgaa
atcaaagatgtattggcagctcgtggcttgtcccttggcatgcggttggaaaattggcca
ccggcaagcctgaaggacgacaaggcctccgcgtga
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