Halomonas alkaliantarctica: QEN58_01220
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Entry
QEN58_01220 CDS
T09033
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
half
Halomonas alkaliantarctica
Pathway
half03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
half00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QEN58_01220
09124 Replication and repair
03420 Nucleotide excision repair
QEN58_01220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
half03021
]
QEN58_01220
03036 Chromosome and associated proteins [BR:
half03036
]
QEN58_01220
03400 DNA repair and recombination proteins [BR:
half03400
]
QEN58_01220
Enzymes [BR:
half01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
QEN58_01220
Transcription machinery [BR:
half03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QEN58_01220
Chromosome and associated proteins [BR:
half03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
QEN58_01220
DNA repair and recombination proteins [BR:
half03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QEN58_01220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Motif
Other DBs
NCBI-ProteinID:
WGI25707
LinkDB
All DBs
Position
248060..250348
Genome browser
AA seq
762 aa
AA seq
DB search
MSVTYRVAVRALCDFTAREGDLDHRFTPAPSAREGIEGHTLVASRRGADYIAELPLTGAF
EGLTVTGRADGFDPTANSLEEIKTHRGSLERMGDNQRALHWAQVKVYGALLCAERGLETL
TLTLVYLDITSGKETLISQNAAADELQAFFAEQCQRFLAWAKQEAGHRQGRDSRLQALRF
PHAAFRPGQRELAEDVYKAASTGRCLLAQAPTGIGKTMATLFPMLSAMPRQQLDRIAFLT
MKTPGRRLALDALAMLRASDETLPLRVLELVAREKACEYPDRACHGESCPLAAGFYDRLP
AARQAAVEQAWLDRDALREVALAHDVCPYYLGQELARWADVIVGDVNHWFDSHALLHGLA
QANDWRTGVLVDEAHNLIERARGMYSAELDQQRFNRVRRAAPKPLSRPLGRLARQWQAVI
RDAGIEEQGEPRRPAYRLLTALPEKLVTAAQQVGAAITDHLGEHPEDASLELQEVLFEAL
AFCRLAEHFGEHSLCDLTRYGRGRAVLGLRNLIPADFLAPRFKAARTSVLFSATLTPAHY
YRDLLGLPENTVWREVASPFAARQLEVRIRSDISTRYRDREASIDPIVATMVQQYQRKPG
HYLAFFSSFAYLEAALARFREVHPEVPVFSQTRGMPEAQREAFLARFAPGGEGIGFAVLG
GAFAEGIDLPGDQLIGAFIATLGLPPFNDFNEALKARLTARFGQGDDYTYRIPGMIKVVQ
AAGRVIRSPEDQGVVVLMDDRFAQASVRALLPRWWSLGNPTP
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgacctaccgcgtggcggtgcgggcgctgtgtgactttactgcccgggaggga
gatctcgatcaccgctttaccccggcccccagcgcgcgcgaaggcatcgaagggcacacc
cttgtagccagccgacgcggggcagactatatcgccgaattgccgctgaccggtgccttt
gaagggctaaccgtcactggccgcgccgatggttttgacccaacggccaacagcttggaa
gagattaaaacccaccgcggcagtttagagcggatgggagataaccagcgcgccctccac
tgggcacaggtgaaggtatacggcgcgctgctgtgtgcggaacgcggcctggaaaccctt
accttaacgttggtttatctggatattaccagcggaaaagagaccctgattagccagaac
gccgctgccgacgaactccaggcgttctttgccgagcagtgccaacgcttccttgcctgg
gcaaaacaggaggccgggcaccgtcaggggcgcgatagtcgcctgcaggccctgcgcttt
ccccatgctgcgtttcgccccggtcagcgggaactcgccgaagacgtttataaagccgcc
agcaccgggcgctgcctgctcgcccaggcgcccaccggtattggtaaaacaatggccacg
ctgttcccgatgctttcggccatgcctcgccagcagctcgatcgcatcgccttcctcacc
atgaaaacccccggccgccgtttggcgttggacgccttggcaatgctgcgcgctagtgat
gaaacacttcctctgcgggtgttggagctggtggcgcgagagaaggcctgcgaatacccc
gatcgagcctgccacggcgagtcatgcccactggccgcaggcttttacgatcgcctgccc
gcggctcgccaagcggcagtagagcaggcatggctggatcgtgacgcgttgcgcgaagtg
gcgttggcccatgacgtgtgcccgtattacctgggtcaggagctggcgcgctgggccgat
gtgatcgtcggcgacgtcaatcactggttcgatagccacgcgctgctgcacggtttggcc
caagccaacgattggcgcacgggcgtgctggtcgacgaagcgcataatctgattgagcgc
gcccgcggcatgtacagcgccgagctcgatcagcagcgtttcaatcgcgtgcgtcgcgct
gccccaaagccgctctctcgacccttgggtcgtttggcccgccagtggcaggcggtgatt
agagatgcggggattgaggaacagggcgagccgagacgcccggcctaccgcctgctcacg
gcgctgcccgaaaagctggtaaccgctgcccagcaggtcggcgctgcgattaccgatcac
ttgggtgagcaccccgaagacgccagtttggagctccaggaagtgttatttgaagcgcta
gcgttttgccgcctggcagagcactttggtgagcactccctgtgtgaccttacccgctac
ggccgtgggcgagcggtgctgggtctccgcaatctgatacccgccgattttctggccccg
cggtttaaagcagcccgtacaagcgtgctattttcggcaacgctaacccctgctcactac
tatcgggatctcctcggcctgccggagaacacggtatggcgtgaagttgcctcccccttt
gctgcgcgtcagcttgaggtgcgaatacgcagcgatatctcgacgcgctatcgtgatcga
gaggcttcgatcgatcctatcgtcgcgaccatggtgcagcagtatcagcgcaagcccggc
cactatttagcgttcttcagcagctttgcctacctggaagcagcgctggcgcgatttcgc
gaggtgcacccggaagtgcctgtgttcagccaaacccgcgggatgccggaagcgcagcgc
gaagcgtttctggcgcgctttgcgcccggcggagaaggcatcggctttgcggtgttgggc
ggtgcctttgcggaaggtatcgacctgcctggcgatcagttgatcggtgcttttatcgcc
accctggggctgccaccgtttaacgactttaacgaagcactcaaagcacgcttaaccgca
cgctttggccagggcgacgattacacctaccgcattcccggcatgatcaaagtggtgcaa
gccgcaggccgcgttattcgtagtccagaagatcaaggggttgtggtattaatggatgat
cgttttgcccaggccagtgtgcgcgcgctattgccacgctggtggtcgctgggcaacccc
actccctaa
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integrated database retrieval system
