Halomonas alkaliantarctica: QEN58_01595
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Entry
QEN58_01595 CDS
T09033
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
half
Halomonas alkaliantarctica
Pathway
half03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
half00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QEN58_01595 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
half03019
]
QEN58_01595 (pnp)
03016 Transfer RNA biogenesis [BR:
half03016
]
QEN58_01595 (pnp)
Enzymes [BR:
half01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QEN58_01595 (pnp)
Messenger RNA biogenesis [BR:
half03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QEN58_01595 (pnp)
Transfer RNA biogenesis [BR:
half03016
]
Prokaryotic type
tRNA degradation factors
QEN58_01595 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WGI25776
UniProt:
A0ABY8LPJ3
LinkDB
All DBs
Position
328778..330946
Genome browser
AA seq
722 aa
AA seq
DB search
MLKEVAVNPVKKTFQYGRSTVTLETGRIARQATGAVMVTMDDTVVLCTVVARKEANPSQP
FFPLSVHYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVVC
TVLSTDRNHDPDIAALLGTSAALSISGVPFSGPIGAARVGFNEEKGYFLNPTVEELGSSE
LDMVVAGTEKAVLMVESEAKELLEDEMLGAVLFGHQEMQVAISAINELVAEAGKPRWEWQ
AAEENQALKAAMADAFEAKVGDAYRITDKMQRQDALAELKDQAIAQLAADEGEPVNDKFS
KDDVKGAFAGLEKRVVRSRVVKGEPRIDGRDNQTVRPLAIEVGVLPKAHGSAIFTRGETQ
AIAVATLGTLRDSQLIESLEGERKDRFMLHYNFPPYSVGEAGFMGGPKRREIGHGRLARR
GVQAMLPSEDVFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLV
KDADGFAVLTDILGDEDHLGDMDFKVAGSEEGVTALQMDIKIEGINEEIMELALQQALTA
RLSILEQMNVVISQSRSDVSDNAPSMATIKIDPDKIRDVIGKGGAMIRKICEDTGASIDL
DDDGTVRIYAEDKAAAKRAIDTVLAITAEAEIGKLYNGKVVRIADFGAFVNIMPGTDGLV
HISQIVAERVNNVRDFLNEGDDVIVKVLDIDNRNRVKLSMKEITEEEKAAFAAEAAETEA
TI
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggaagtcgctgtgaatccggtaaagaaaacgttccagtacggtcgtagcacc
gtcacgctcgaaaccgggcgtattgcccgccaagctaccggcgctgtcatggtaacaatg
gatgacaccgtcgtgctgtgtaccgttgtcgctcgtaaagaggcaaacccgagccaaccc
tttttccccctctcggtacactaccaagagaaaacctacgcagtgggcaagattcctggc
ggcttcttcaagcgcgaaggacgccccactgagaaagagacgctgacctcgcgcttgatt
gatcgcccgatccgtccgctgttccccaaaggcttcatgaacgaagtgcaggtcgtctgt
accgttctctctaccgaccgtaaccacgatccggatatcgccgctttgcttggcacctcc
gcggcgctgagcatctctggcgtgccgtttagtggcccgattggcgcagcccgcgttggt
tttaacgaagagaaaggctacttcctcaacccaacggttgaagaactgggctcctcagag
ctggacatggtcgtcgccggtaccgaaaaagccgtgctgatggttgagtctgaagccaaa
gagctgctagaagacgaaatgctgggcgccgttctgttcggtcaccaggaaatgcaggtc
gcgatcagtgccattaacgaactggttgctgaagcgggcaagccgcgctgggagtggcag
gccgccgaagaaaaccaagcgcttaaagccgctatggccgatgcctttgaagctaaagtg
ggcgacgcttaccgcatcaccgacaaaatgcagcgtcaggatgcactggctgagttgaaa
gaccaggcgattgcacagctggcagccgatgaaggcgaaccggttaacgacaagttcagt
aaagatgacgtcaaaggtgcctttgctggcctggaaaaacgcgttgtgcgttcacgggtg
gtaaaaggcgagccgcgtattgatggtcgtgacaatcaaaccgttcgtccgctggccatc
gaagtcggtgtgctgccgaaagcgcacggttctgccatctttacgcgtggtgagacccag
gcgattgccgtagcaacgctgggcacgctgcgtgattcacagctaatcgaatcactggaa
ggtgagcgtaaagaccgctttatgctgcactacaacttccctccctactcggtgggtgaa
gctggctttatgggtggcccgaagcgtcgcgaaatcggccatggccgcttagcgcgtcgt
ggcgtgcaggcgatgctaccgtcagaagacgtcttcccctacaccattcgcgtggtgtct
gaaattaccgagtctaacggttccagctccatggcctctgtatgtggctcttcgctggct
ttgatggatgcaggcgtgccgctaaaagcaccggtcgccggtattgccatgggcttggtg
aaagacgccgacggcttcgcggtattgaccgatatcctgggtgacgaagatcaccttggc
gatatggacttcaaagtcgccggttccgaagagggtgtcaccgccctgcagatggacatc
aagatcgaaggcatcaacgaagagattatggagctcgcgctgcagcaagcactgaccgcg
cgtctgagtattctcgagcagatgaatgtcgtgatcagccagagccgtagcgatgtctcc
gacaacgcgccgtccatggcaacgattaaaattgatccagacaagatccgtgacgttatc
ggtaaaggcggcgcgatgattcgcaaaatctgcgaagacacaggcgcctctatcgacctt
gacgacgatggcaccgtacgtatctatgcggaagataaagctgccgccaagcgtgcgatt
gacaccgtactggcgattaccgcagaagcggaaatcggcaagctgtataacggcaaggtc
gtgcgtattgccgacttcggtgcgttcgttaacatcatgcccggcaccgatggtctggtg
catatctcgcaaatcgttgccgaacgcgttaacaacgtgcgcgacttcttgaacgaaggc
gatgatgtgatcgttaaggtgctggatatcgacaaccgcaaccgcgtgaagctgtcgatg
aaagagatcaccgaagaagagaaagccgcttttgcagctgaagcagcggaaaccgaagcc
acgatttaa
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