Halomonas alkaliantarctica: QEN58_05350
Help
Entry
QEN58_05350 CDS
T09033
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K12146
hydrogenase-4 transcriptional activator
Organism
half
Halomonas alkaliantarctica
Brite
KEGG Orthology (KO) [BR:
half00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
half03000
]
QEN58_05350
Transcription factors [BR:
half03000
]
Prokaryotic type
Helix-turn-helix
Other families
QEN58_05350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
PAS_4
PAS_8
AAA_5
AAA
Mg_chelatase
HTH_8
PAS_3
AAA_2
AAA_16
AAA_3
Motif
Other DBs
NCBI-ProteinID:
WGI26490
LinkDB
All DBs
Position
1187949..1189907
Genome browser
AA seq
652 aa
AA seq
DB search
MDEQKRTHAAALMGGFSPLAMVVVDPFADQLLDANPAACELLNIGEALPLKAPFSHRLSA
SLPLWVCFTDEALVQKTAWSDDLVILDMLRQPYRVEVYAQHIEDSSQLLLTLIDRNKAEQ
RRAKAELGRQHRQGEVGWQRVEQVFEQIEKQNQLILGAAGEGIYGLDAEGKTTFVNPAAE
RILGWSTEDMVGHGAHLMFHHTHADGSHFPVQQCPIHASFSDGQVHHVDNEVFWHKNGEA
IPVEYTSTPIFEMGRLVGAVVLFRDIRERKRAEQQLRDALVEVESLKQRLELENEYLQEE
IKAELNHRDIVGNSPAVAKLIQQIELVAPTSANVLISGESGTGKELIARAIHAGSTRSDR
PLIRVNCAAIPRDLFESEFFGHVKGAFTGAVQDRPGRFELAHGGTLFLDEVGEIPLELQS
KLLRVLQDQQFERVGDNRTREVDVRVIAATNRELRDMIDAGHFREDLYFRLNVFPIDSVP
LRKRIEDVPLLARHFLQRACLKFNKPGVRIPPAQLEILQRYPWPGNIRELENIIERQVIV
TQDRRLMFDDLLLGEPPRSIGRTNPVPASAHASVEKSETLLLTEHALGQRQRESTIAALE
RAGGKVSGAGGAAELLGIKPTTLASRLNKWGIDTREFRKRKFDLSPTHHALD
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcaaaaacgcactcacgccgcagccttgatgggcggcttctcacccctagcg
atggtcgtggtcgacccttttgccgatcagttgctagacgctaaccctgccgcctgtgag
ttgctgaatattggtgaagcactccctctaaaggcgccttttagccatcgtttgagtgct
tcactgccgttatgggtgtgttttaccgatgaggcgctggtgcaaaaaacggcctggtca
gatgacctagtgatactagacatgctgcgccagccttatcgagtagaagtttatgctcag
catattgaagactcttcgcagctgttactgacgctgatcgaccgcaataaagctgagcag
cggcgagcaaaagcggaattaggccgccaacaccgccagggagaggtgggctggcagcgg
gtcgagcaggtattcgaacagattgagaaacagaaccagctgattctgggcgcggcgggt
gagggcatttatggcctggatgcagagggtaaaaccacctttgttaatcccgctgctgag
cgcattctgggctggagtaccgaggatatggtaggccacggcgcgcacctgatgttccac
cacacacacgccgatggcagccacttcccggtgcagcagtgccctattcacgcatcgttt
agcgatggccaggtgcatcacgtcgataatgaagtcttctggcataaaaatggtgaagcg
attccggttgagtacaccagcacccccatttttgaaatgggccgcttggtaggggctgtg
gtgctatttcgcgatattcgcgagcgcaagcgcgccgagcagcaactgcgtgatgccctt
gtagaggtggagtcactcaagcaacgtctggagctggagaatgagtaccttcaagaagag
ataaaagcggagcttaaccaccgcgatattgttggcaatagcccggcggtggcaaaactg
atccagcagattgagctggttgcacctactagcgccaacgtgctgatcagcggagagtcg
ggtaccggcaaagaactgattgcccgcgccatccatgcggggagtacacgcagtgatcga
ccactgatccgtgtgaactgtgcggctattccccgtgatctgtttgagagcgagtttttt
ggccatgtaaaaggcgcctttaccggcgcggtacaggatcgtccagggcgcttcgaactt
gcacacggcggcacgctatttttggatgaagttggtgaaatccctttggaactgcagagc
aagctgctgcgggtgttgcaggatcagcagtttgagcgcgtgggcgataaccgcacccgc
gaagtggatgtgcgggtgattgctgctactaaccgtgagctacgtgacatgatcgacgcg
ggccactttcgggaggatctctatttccgcctcaacgtgttcccgattgattcggtaccg
ttgcgcaaacgaatagaagatgtaccgctactggcacggcattttttacagcgtgcctgc
ctgaaatttaataaacctggagtacgcattcctcccgcccagttggaaattcttcagcgc
tacccatggccgggcaatattcgtgagctggaaaacattattgagcgccaagtgattgtg
acccaggaccgccgcttgatgtttgatgacctgctgttgggggagccaccgcgctcaata
ggtcgtactaacccggtgcccgcgtcagcccacgctagcgtggagaaaagtgaaacactg
ctgctgaccgaacatgcgcttggccagcgccagcgggagagcacgattgccgctctggag
cgggcgggaggtaaagtttcaggggcaggaggtgcggcggagctgctgggcatcaagccc
actacgcttgcttcacgcctgaataaatggggaattgatacacgggagtttcgcaaaaga
aagttcgatttatcgccaacccatcacgctttggactaa
DBGET
integrated database retrieval system
