Vreelandella neptunia MSP3: QEN58_09190
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Entry
QEN58_09190 CDS
T09033
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
half
Vreelandella neptunia MSP3
Pathway
half03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
half00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QEN58_09190 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
half03400
]
QEN58_09190 (uvrB)
DNA repair and recombination proteins [BR:
half03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEN58_09190 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QEN58_09190 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
DUF87
UB2H
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
WGI27220
UniProt:
A0ABY8LS14
LinkDB
All DBs
Position
2023190..2025214
Genome browser
AA seq
674 aa
AA seq
DB search
MSKAFRLQSKFQPAGDQPAAIKGLISGLESGLAHQTLLGVTGSGKTFTMANVVEQQQRPT
IVMAPNKTLAAQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRAFLRRLAELQ
YTRNDMDFRRGTYRVRGDVIDIFPADSDEEAVRVELFDSEIDTIRLFDPLTGAVRGEVPR
MTIYPKSHYVTPRETILGAIDAIKEELKERLEWMRKHERLVEAQRLEQRTLYDIEMMLEL
GYCNGIENYSRYLSGRAPGEPPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWEAISPQTIFVSATPGRYEGEHASQTVEQVVRPTGLLDP
EIEVRPASTQVDDLLSEIGLRTAVGERVLVTTLTKRMAEDLTEYFDEHGIRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR
AARNAHGKAILYGDRITDSMRKAIDETERRRAKQTEHNLEHGITPTTVTRSVADILEAAQ
APGKKSSRRRGNERKVAESVAEYDVTTMSKQDLLGAISKLEDAMFEAAQNLEFEEAARLR
DQLHQMKDKQLALG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcctttcgattgcagtcaaaatttcagcctgctggcgaccagcctgccgcc
atcaaggggctgattagtggcctggaatctgggcttgcccaccaaacgctgcttggcgtg
accgggtcgggcaaaaccttcaccatggccaatgtggtggaacagcagcagcgcccgacc
atcgtgatggcgccgaacaagacgcttgcggcccagctatacggcgaattcaaggcattc
ttcccggataacgccgtagagtatttcgtctcctactacgactactaccagccggaagcc
tatgtgccttcctcggatacctttatcgagaaagatgcctcgataaacgaccatattgag
cagatgcggctttcggccaccaaggcactgctagaacgccgtgacgcgctgattgtggtg
tcagtttcggcgatttatggcctgggtgaccccgaccaatacctgaaaatgcgtctccac
tttacccgcggtgagctcattgatcagcgcgctttcctgcggcgtttggcggagcttcag
tacacccgcaatgatatggatttccgccgcggtacttaccgggtgcgcggcgatgtgatc
gatatcttccccgccgactctgacgaggaggcggtgagggtagagctgtttgacagcgaa
attgacactattcgattgtttgatccgctcacgggtgctgttcgtggggaggtgccacgg
atgaccatctaccccaaatcacactacgtcactccgcgggaaactatcctgggtgccatt
gatgccattaaagaggagctcaaagagcgtctggagtggatgcgtaagcatgaacggctg
gtagaagcgcagcgtcttgagcagcgcaccctttacgatattgagatgatgctggagctg
ggttactgcaacggtatcgaaaactactcccgatacctctctgggcgtgccccgggcgag
ccgccgccgacgttctttgattacctgcccgatgacgcgctgctatttatcgacgagtcc
cacgtcagcgtgccccaggtaggtggcatgtacaaaggcgaccgctcgcgtaaagagacc
ctggtcgagtatggcttccggctgccctctgcgttggataaccggccaatgaagtttgaa
gagtgggaggccatttccccacaaacgatctttgtttccgccaccccgggtcgctatgag
ggtgaacacgccagccagaccgttgagcaggtggtgcgtcccaccgggctgctggatcct
gaaatcgaagtgcgcccggccagtacccaggtcgacgatctgctttcggaaattggcctg
cgcaccgcagtaggtgagcgggtgctggtgaccacgctaaccaagcgtatggcggaagac
ctgactgagtattttgacgagcacggcattcgagtgcgctatttacattcggatatcgac
accgtcgagcgggttgagattattcgcgacttacgcctgggcaagtttgatgtgttggtg
ggcatcaacctgctacgcgaaggcctggatattcctgaagtgtcgttggtggcaattctc
gacgccgataaagaaggctttctgcgtgccgagcgctcgctgatacagaccattggccgc
gctgcccgtaacgcccacggtaaggcgattctttacggtgatcggattactgactcgatg
cgcaaggcgatcgacgaaaccgagcgtcgccgcgccaagcagaccgagcacaacctagaa
cacggtattacccccacaacggttacccgctcggtggccgatattcttgaagctgcccag
gcgcctggcaagaagagcagtcgccgccgtggtaatgagcgcaaggtggcggaaagcgtc
gccgagtatgatgtcaccaccatgagcaagcaagacctgctgggcgccatcagcaagctc
gaagacgccatgtttgaggcagcgcaaaatcttgagttcgaagaggcggcgcggcttcgc
gaccaactccatcaaatgaaagacaaacagctggcgctgggctag
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