Halomonas alkaliantarctica: QEN58_09920
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Entry
QEN58_09920 CDS
T09033
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
half
Halomonas alkaliantarctica
Pathway
half03030
DNA replication
half03430
Mismatch repair
half03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
half00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QEN58_09920
03430 Mismatch repair
QEN58_09920
03440 Homologous recombination
QEN58_09920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
half03032
]
QEN58_09920
03400 DNA repair and recombination proteins [BR:
half03400
]
QEN58_09920
Enzymes [BR:
half01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QEN58_09920
DNA replication proteins [BR:
half03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QEN58_09920
DNA repair and recombination proteins [BR:
half03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QEN58_09920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WGI23673
UniProt:
A0ABY8LJX4
LinkDB
All DBs
Position
2166097..2167482
Genome browser
AA seq
461 aa
AA seq
DB search
MSETAFIFVDVETTGTRATRDRVTEIAALKVVNGELVDRWSSLIYPECKVPAQITQLTGI
RDDMLADAPRFAQIAESLREWLGDGQLVAHNARFDYSFLRNEFKRAGQDYRAALICTLRL
SRRIAPQERQHNLKALLNRYGITPTRRHRAGDDVDALWSLWQTWHVEHSDEAWQRLLGDE
RRHRTLPAHLDSAQLEGLPACPGVYLFYGHNRLPLYVGKSINLRSRVLGHFQRDHQDDKE
MRLAQQVQHIEWEETAGDLGAQLREAQLVKTLMPIMNRQLRKQRKLTTWHWAEEADHPEL
LSGSALTQPLGGTLYGLFRNAREAKNALRTIAEEQQLCPRVLGLEKGKGRCFANQVGKCR
GACNGQETIAAHTQRAQEALIQLQVNVWPWPGSIAIEEKSAGATASAWHVVRQWCYLGSA
ASFNKAQTLAETPASFDVDSYRILNRFLRYPEQHGLTVTPL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacagctttcatttttgtagacgttgagaccaccggcactcgcgcaacaagg
gatcgggttaccgaaatagccgccctcaaggtcgtcaacggcgagctggttgaccgctgg
tcgagcttaatttacccagagtgcaaagtgcccgcgcaaatcacccaactgactgggatt
cgcgacgacatgctggctgatgcgccacgctttgcgcagatagcggagtcgcttcgggag
tggctgggcgacgggcagctagtggcccacaatgcgcgctttgactacagctttttgcgc
aacgaattcaagcgtgccgggcaggattaccgtgcggccttgatatgcacgctgcgctta
tcccgccgaatagcgccccaagagcgccagcacaacctaaaagccctgcttaaccgctac
ggcattacacccacccgccgccaccgtgccggagacgatgtcgatgcgctttggtcactc
tggcaaacgtggcatgttgagcatagtgatgaagcctggcagcgcctgctgggcgatgag
cgccgccaccgcacgctgcccgcccacctggatagcgctcaactggaagggttacccgcc
tgccctggggtttacctgttttacggtcacaaccggctgcccctgtatgtgggcaaaagc
atcaacctacgtagccgcgtactggggcactttcagcgcgaccaccaagacgacaaagag
atgcgcctcgcccagcaggtgcagcatatcgagtgggaagagaccgccggcgatttaggc
gcccagttgcgtgaagcgcagctggttaaaacgttaatgccgatcatgaaccggcaactg
cgcaagcagcgcaagttaactacctggcactgggcggaggaagccgaccaccctgagtta
cttagcggtagcgcgctgacccagccactaggcggcacactgtatggtttgtttcgtaat
gcgcgggaggccaagaacgccttgcgcaccattgccgaagagcagcagctctgccctcgg
gtgttggggcttgaaaaaggtaaggggcgctgttttgccaatcaggtgggtaagtgccgt
ggggcgtgcaatgggcaggagacgatagccgcgcatacccagcgggcgcaggaagcgctc
attcagcttcaggtcaacgtatggccctggccgggtagtattgcgattgaggagaagtca
gcgggcgcgacagcgtctgcatggcatgtcgttcgtcaatggtgctatctgggcagcgcg
gcaagttttaataaagcgcagacgctggcggaaacacccgccagctttgatgtagatagc
taccgcattttgaaccgttttttacgttatccagagcagcacggcttaacggttacgccg
ctctga
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