Halomonas alkaliantarctica: QEN58_12960
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Entry
QEN58_12960 CDS
T09033
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
half
Halomonas alkaliantarctica
Pathway
half03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
half00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QEN58_12960 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
half03400
]
QEN58_12960 (recC)
Enzymes [BR:
half01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QEN58_12960 (recC)
DNA repair and recombination proteins [BR:
half03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QEN58_12960 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WGI24243
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All DBs
Position
2836134..2839772
Genome browser
AA seq
1212 aa
AA seq
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MSANSLLTQTPLTPGFMVVHANRLEDLRGLAVEWMRRHPLSPLENETILVQSNGIGQWLK
LALAEDPAQGGAGIAAALNVTLPARFLWQAYRTVLTQLTHDDQAVPETSPFDKSRLIWRL
LRLLPSLAEQEAFAPLARFLEVDRDQRKHYQLAERLADLFDQYQVYRADWLDAWAKGNDV
LITARGEARPLEAHQMWQPELWRALRDDVANNLGDAGLNSSRAQVHSRFLDAAVQLEGQD
CPNGLPRRLIIFGISSLPQQMLEALAALSRCCQIVLCVHNPCQYYWADIIEHKDLLRASR
YRQRRKVGMPDTLDVLGTGDVDDALHLHAQPLLAAWGKQGRDYLRLLDEHDDAGNYQTLF
EQQALRIDMFEPFSGEEHNCLLSQLQDDIRELRPVAETQTHWPALDPTSDDSIVFHIAHG
PQREVEILHDQLLAAFSADPELRPRDIIVMVPDIDRYAPHIEAVFGQYRAAFGSYNANAR
PDDPRYIPYTLSDQASRHRLPMMIALEKLLRLPELRLSVSDLLDLLEVPALRTRFGIDEH
DLPTLSRWIEGAGIRWGLNAEQRTRLDLPEGLTQNTWAFGLRRLLLGYTVGSAEAWQGIE
PFDDIGGLEASLAGPLANLLEKLESTWETFCQPTDTATWVARLRELLETYFLTDDAQESV
MLTKLETALQQLLDSTEEAALVDPLPLSMVREHWLGQIDEHSLSQRFLAGAVNFATLMPM
RAIPFKHVCLLGMNDGEYPRSQPPLDFDLMGSDYRPGDRSRREDDRYLFLEALLSARQQL
YISWVGRSQIDNNPMPPSVLVGQLRDHLEAGWHTKNGEPLLEALTTEHPLQPFSRRYFTE
PPSDSPAQARLFTYAHEWHALHTSNGESTQGAKSPALKADSEQQSTLTLNQLGSFLRDPA
KAFFNTRLGVYFEQEELTQLDVEPFTLDGLQNWQLQDQLIAAQRHAVDNGQPRVEALHAA
LERFKGQGVLAVGAFGERMREALAEPMEALFGAYEEALQEWPHVVAAPQAVHVAVERAES
AESAEGQITLEDWLGELRQDEAGNRCRLLLLSSSLVSQGRGRGQYRWQHLLRPWVAHLAG
NSEHPMTTQLLSKAGHVRLEPLETENARYQLDALLSAWCDGMQAPLPLAPQAAFAWLAKL
GTPDSENDSDAYAAAETAYEGGRFQTGEVAQSAYLSHQWPSFEKLFNERALGHSFATLSE
ALYAPLHSAVKG
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaactctctgctcacgcaaacgccgctaacgcccggctttatggtggtgcat
gccaatcgcctggaagatttgcgcggtttggcggtggagtggatgcgccgacacccgctc
tcgccgctggagaacgagaccattctggtgcagagcaacggcattgggcagtggctaaaa
ctggcgctagcagaagacccggcccaaggcggtgcaggcattgccgcagcattgaacgtt
acgctgcctgcgcgctttctatggcaggcctaccgcacagtgcttacgcagctaacccac
gacgaccaagcggtgcccgaaacctcgccgtttgataagtcacggttgatatggcgcctt
ctgcgcctgttgcccagccttgccgagcaggaagcttttgcaccgctggcgcgctttttg
gaagtcgatcgcgaccaacgcaagcactaccaactggccgagcggctggcggatctgttc
gaccagtaccaggtgtatcgcgccgactggctggacgcctgggcgaagggtaacgacgta
ctcatcaccgcccgtggcgaagcccgcccgctggaagcacaccaaatgtggcagccagaa
ctgtggcgcgcactgcgcgacgatgtggccaataatctaggcgacgcaggccttaacagc
agccgtgcccaggtacacagccgctttctggacgccgccgttcagcttgaaggtcaggac
tgcccgaacggattgccccggcgattgatcattttcggcatctcatcgctgccgcaacag
atgttagaagcactggcggcgctatcgcgctgctgccagatcgtgctctgcgtgcacaac
ccctgccagtactactgggcggatatcatcgagcataaagacctgctgcgcgccagccgc
taccgccagcggcgcaaggtcggcatgcccgacactttggatgtattgggcaccggcgat
gtcgacgacgccctgcacctgcacgcccagccgctgctggccgcctggggcaaacagggg
cgcgactatctgcgcctgctcgacgagcacgacgatgcaggcaactaccaaaccctattt
gagcagcaggcgttgcgcatcgacatgttcgaacccttcagcggcgaagagcacaactgc
ctgctcagccagctacaggacgatatccgcgagctgcgcccggtcgcggaaacccaaacc
cactggcccgcgctcgacccgaccagcgatgactccatcgtgttccatatcgcccacggc
ccccagcgggaagtggagattcttcacgaccagctactggcggcgttcagcgccgacccg
gagctgcgcccgcgggatatcatcgtcatggtgcccgatatcgaccgctatgcgccgcac
atagaagccgtgttcggacagtaccgcgccgctttcggtagctataacgccaatgcgaga
cccgatgacccacgctacatcccatataccctttcggatcaggccagccgccaccgcctg
ccgatgatgatcgccctggaaaaacttctgcgcctgccggaactgcgcctctcggtaagc
gatctactcgacttgctggaagtccccgcgctgcgcacccgctttggcatcgatgaacac
gacctgcccaccctcagccgctggatcgagggcgcgggcatccgctgggggctcaatgcc
gagcagcgcacccgactcgacctacccgaagggctaacccagaacacctgggcctttggc
ctgcgccgactgctgctgggttacaccgtgggcagtgcagaggcatggcaaggcattgag
ccattcgacgatattggcgggctggaagcttccctggcaggtccgctggcaaatctgctg
gagaagctggaaagcacttgggaaaccttctgccagcccaccgataccgccacctgggtg
gcccggctgcgcgagctgctggaaacctacttcctgaccgacgacgcccaggaaagcgtc
atgctcaccaagctggaaaccgcactccagcagttgctggacagcaccgaagaagccgcg
cttgttgatcccctgccgctctccatggtgcgcgaacactggctggggcaaatcgacgaa
cacagcctttcccagcgctttcttgcgggtgcggtcaacttcgccaccttgatgccgatg
cgggctattcccttcaaacacgtgtgcctgctgggcatgaacgatggcgagtacccgcgc
tcgcagccgccgctggattttgacctgatgggcagtgactaccgccccggcgaccgctca
cggcgcgaagacgaccgctacctgtttctggaagcgctgctttccgcccgccaacagctc
tatatcagttgggtgggccgcagccagatcgacaacaaccccatgccgccctcggtgctg
gtcggccagttacgtgaccacctggaagcgggctggcacacgaaaaacggcgagccgctg
ctggaagcgttaacgaccgaacacccgctgcagccgtttagccgccgctactttactgaa
ccacccagcgactcacccgcccaggcacggctgtttacgtatgctcacgagtggcacgcc
ctgcatacctctaacggcgaaagtacccaaggcgcaaagtcaccagcgctaaaggcagac
agtgaacagcagagcacactaaccctgaatcagctgggcagctttctacgcgaccctgcg
aaggcatttttcaacacccgcctgggggtctatttcgagcaggaagagcttacccaactg
gatgtcgagcccttcaccctggacgggctacagaactggcagttgcaggatcaattaatc
gccgcccagcgccatgccgtggataacggccagccgcgagtggaagcgctgcatgccgca
ctggaacgctttaaaggccagggcgtgctggccgtgggcgccttcggcgagcggatgcgt
gaagcgctggcggaaccgatggaagcactattcggcgcctacgaagaggcactgcaagag
tggccacatgtggtagccgcgccacaggcggtgcatgttgctgttgaaagagctgaaagc
gctgaaagcgcagaaggacagataacgctggaggactggctgggagaactgcgtcaggat
gaggcgggcaaccgctgccgcctgttactgctcagcagcagcttggtcagccaggggcgt
ggccgtggtcagtaccgctggcagcatctgctgcggccctgggtcgcgcatctggcgggc
aatagtgagcacccaatgaccacccagctactttccaaagccggccatgtgcgcctggaa
ccgttagagaccgagaatgcccgctaccagctagatgccctactcagcgcctggtgcgat
ggcatgcaggcaccgctaccgctggctccgcaagccgctttcgcttggctggctaagctt
ggcacgcctgacagtgagaacgatagcgacgcctacgccgccgccgaaaccgcctacgaa
ggcggccgcttccagaccggcgaagtcgcccaaagcgcctacctctctcaccaatggcct
agcttcgaaaagctattcaacgagcgtgccctcggccacagcttcgccacgctgagcgaa
gcgctctacgcgccgttgcacagtgcggtaaagggatga
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