Vreelandella neptunia MSP3: QEN58_12980
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Entry
QEN58_12980 CDS
T09033
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
half
Vreelandella neptunia MSP3
Pathway
half03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
half00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QEN58_12980 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
half03400
]
QEN58_12980 (recD)
Enzymes [BR:
half01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QEN58_12980 (recD)
DNA repair and recombination proteins [BR:
half03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QEN58_12980 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
AAA_16
AAA_28
nSTAND3
PhoH
UvrD_C
NTPase_1
T2SSE
NACHT
Motif
Other DBs
NCBI-ProteinID:
WGI24247
UniProt:
A0ABY8LKZ4
LinkDB
All DBs
Position
2845302..2847563
Genome browser
AA seq
753 aa
AA seq
DB search
MSNRDTQSMNLDLFADDAPPAAPDSTAPVTPPTESVAQPHPALSDTAALFLLCERWVSRG
WLRDLDLALVRFLDRETQNAPPLLLLGAALASHQLGRGHVCLDVAATLEAPDFALSLPPE
GDDLNDPPPLPSHVLATLTLPEWQAALNHPTLISDGPGNTPLVKSDSSLTTRLYLRRYWQ
FEQTLHHEIAARLSTGHSAQSPLLKSALDALFPATEKLDWQKTACALAARSPFAIITGGP
GTGKTTTVVRLLALLQTLQLAQPNAHPLRIRLAAPTGKAAARLNESIAGQVNDLPVSGLE
SLLDEHSAASSSKAIDIPTEVTTIHRLLGARADTRHFRHNAANPLALDVLVVDEASMVDI
EMMTALLSALPASAKLVLLGDKDQLASVEAGAVLGDLCRRADAAHYTPATAQWLAELTDH
PLPETLIDPNGQPLDQAITMLRVSHRFTETSGIGQLAQAINQPLSEALRERDKHQAVHGV
LNNGYADLHHLVLKPDAQNEDSALERLVITGSPERFPNAGEGRTNFTAEPIAPPTGYQHY
LNTLASERPDTTLAFEENGEIYDAWAKQVLNAYSRFQLLCALRKGPWGVEGLNLRIAKTL
RREKLLYGNDHTLEKGWFEGRPVLVTQNDYGLKLMNGDIGITMAVPDPRTPGRTLLRVAF
PTSDPENPIHWVLPSRLHAVETVFAMTVHKSQGSEFQHTALLLPQTPNPILTRELVYTGI
TRARDWLTLIEAKRGILNDAVTREVMRVSGLEM
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatagagacacacaatctatgaacctagacctgttcgccgatgacgcgccgccc
gctgcacccgattcaaccgcaccggtaacgccaccgacagaatcagtcgcccagccgcac
cctgcgctaagcgacaccgccgcgctattcctactgtgtgaacgctgggtttcccgtggc
tggctgcgggatctggatttggccctggtgcgctttctcgaccgcgaaacccagaacgcc
ccgccgctactgttgctaggcgcagcgctggccagccaccagctcggccgtggccatgtt
tgcctggatgtagccgccaccctggaagcgccggattttgcgctttcgctgccgccggaa
ggcgacgacctgaacgacccgccaccgctgcccagccatgtgctggccacgctaacgctg
cccgagtggcaggccgcgctcaaccaccccacgctgatcagcgacggccccggcaatacg
cccctggtgaaaagcgactcctcgctcactacccggctctacctgcgccgctactggcag
ttcgagcaaaccctgcatcatgaaatcgctgcgcggctcagcaccggtcactcggcgcaa
tcgccactactcaaaagcgcgctggatgcattattccccgccactgaaaagctagattgg
caaaaaaccgcctgcgcacttgctgcccgcagcccgttcgcgatcatcaccggcggcccc
ggtaccggcaaaaccaccaccgtggtgcgcctgcttgccctgttgcaaaccctgcaactg
gcccagcccaacgcccatccgctgcgcattcgcctggccgcccctaccggcaaagccgcc
gcacggctgaatgaatccatcgccgggcaggtgaatgacctacccgttagcgggttggaa
tcgctattagatgagcactcagccgcttcctcatcgaaggcaatagacattccgacggaa
gtgaccacgatccacaggctactgggcgcccgcgccgacacccgccacttccgccacaac
gccgccaacccgctggcgctggatgtgctggtggtggatgaagcctcgatggtggatatc
gaaatgatgacggcgctgctaagcgccctgcccgccagcgccaagctggtgctgctgggg
gataaagaccagctggcatccgtggaagcaggcgccgtgctgggcgacctgtgccgccgc
gccgacgcggcccactacacacccgccacggcgcagtggctggccgaactcaccgaccac
ccgctgccagaaacattaatcgaccccaacggccagccgctggatcaagccattaccatg
ctgcgggtaagccaccgttttactgaaacaagcggcattggccagctcgcccaggcgatt
aaccagccgctaagtgaggcattgcgggaacgggataaacaccaagccgtgcatggcgta
ctgaataacggctacgccgacctgcaccacctagtgttgaagcctgacgcgcaaaacgaa
gacagcgccctagagcgcctggtgatcaccggcagcccggaacgttttcccaatgcaggc
gaaggccgcaccaatttcacggccgagccgattgcaccgcccaccggctaccagcactac
ctaaataccctggcgagtgaacggcccgataccaccttggcatttgaagagaacggtgag
atttacgatgcctgggcaaagcaagtactcaacgcctatagccgctttcagctgctatgt
gcgctacgcaaaggcccatggggagtagaaggcttaaacctgcgcatagccaaaaccttg
cgtcgtgaaaagctgctgtatggcaacgaccacacgttagaaaaaggctggttcgaaggc
cgcccggtactggtcacccaaaatgactacggtctgaaactgatgaacggcgatatcggc
atcaccatggcggtgccagatccacgcactcccggtaggacacttttacgcgtcgccttt
ccgaccagcgacccggaaaacccgattcactgggtgctgccttcccgcctgcacgcggta
gaaaccgtgttcgcgatgacggtacacaaatcccaaggctcggagtttcagcacaccgcc
ctgttgctaccgcaaactcccaacccgatcctgactcgcgagctggtctacaccggcatc
acccgcgcccgcgactggctcacgctgatcgaagccaaacgtgggatattgaatgatgcg
gtgactagggaggttatgagggtgagtgggttggagatgtaa
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