Halomonas alkaliantarctica: QEN58_14565
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Entry
QEN58_14565 CDS
T09033
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
half
Halomonas alkaliantarctica
Brite
KEGG Orthology (KO) [BR:
half00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
half03021
]
QEN58_14565 (rpoS)
Transcription machinery [BR:
half03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QEN58_14565 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
WGI24545
LinkDB
All DBs
Position
complement(3169258..3170232)
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AA seq
324 aa
AA seq
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MSMLEKDLQEVDLDAAEEALDDTDDDVAVEEDAFEKALGREDRQSTQSLDATQIYLNEIG
FSPLLTPEEEVYYGRLARKGDPLGRSRMIESNLRLVVKIARRYLNRGLTLLDLIEEGNLG
LIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRAARELT
QKFDHEATAEEIADHLDKPVDVVKKMLGLNERVSSVDYPMGGESDKPLIDTLADDEVQGP
EARLVDGDVKEHVDLWLDELSEKQREVVVRRFGLRGHESATLEEVGAEIGLTRERVRQIQ
VEALKKLRRALEKQGLSLEALFET
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttggagaaagacctacaggaggttgacctggacgctgccgaggaggcactt
gatgataccgacgacgatgttgcggtagaagaagatgctttcgagaaggcgctagggcgt
gaggatcgtcaatcgacccaaagcttggatgcaacgcaaatctacctcaacgaaatcggc
ttttcgccactgctaacgccagaagaagaagtttactacggccgcttggcgcgtaaaggt
gaccctttgggtcgctcgcggatgattgaatccaacctgcggctggtagtgaaaatagcc
cgccgctatctgaaccgcggcttgacgttgctggatttgatcgaagagggcaatttgggt
ttgattcgcgcggtagagaagtttgatcccgaaaggggcttccgtttctcgacctacgcc
acttggtggatccgccaaaccatcgaacgggcgctgatgaaccagacgcgaacgatccgc
ttgcccattcacgtagtcaaagaactcaatatttacctgcgtgcggcgcgggaattaacc
caaaaatttgatcatgaagctaccgccgaagagatcgctgatcaccttgataaaccggtc
gatgtggtgaaaaagatgctcggccttaatgagcgagtgtcgtcggtcgactaccccatg
ggtggcgagagtgataagccgctgattgatacgttggctgacgatgaggttcaaggccca
gaggcacgcctggtggatggcgatgtcaaagagcatgtggatctgtggctggatgagctg
agcgaaaaacaacgcgaagtggttgtccgccgctttggcttacgtggccacgagtctgca
actctggaagaagtgggtgccgaaattggtttaacccgtgagcgggtgcgccagatacag
gtcgaagcactcaagaaactacgtcgtgcattggaaaaacaggggctttctcttgaagcg
ctgtttgaaacctaa
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