KEGG   Halomonas alkaliantarctica: QEN58_16230
Entry
QEN58_16230       CDS       T09033                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
half  Halomonas alkaliantarctica
Pathway
half03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:half00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    QEN58_16230 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:half02044]
    QEN58_16230 (tssM)
Secretion system [BR:half02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   QEN58_16230 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical NAD_binding_9 DUF2207_C MMR_HSR1 fn3_3
Other DBs
NCBI-ProteinID: WGI24857
UniProt: A0ABY8LNE3
LinkDB
Position
complement(3527289..3530894)
AA seq 1201 aa
MSKAQSAHNRAQAHGNKAKGLLRISTLLWAVLLIVLLVAIWWLGPSWEVRGVMPLAPLTN
RLLATLVVVTVIAVVWGVRLARRLRALDEERQQEDARQQDPIMSQVERQEASLNSVLSEI
TNSLGGGHSSRYHLPWYLVMGVENAGKTSLINRSGQNFALTHVMKASGQSSKQGQLGFDW
WIGDKAVLIDPDGELLTQGAMEGGEPQALQSRLWDHFVDWLERNRAQRPLDGVVLVLDLA
RLSHAQVAVRKAYAALLRSRLRELMERHGTRLPVYVTFSKMDLLHGFDDFFRHYSREARR
APLGFTFTPASMETPGKWESEFETDYDAMLARLNQLLPSMLSECRDREERESVFRFVRQL
AGLRDVLFGFLTEALSSDRFSTAAMVRGTYFTSVYQQGVPEDPFVDAAARRYGMDDNVQP
AHRATRSALYFTEELFDKVIYPEAGLAGDNARVTQRRRRTRNISLVACLVMGMGLIGGWA
HFYQKNSVSLAAVEERAETFLATQPEAFQSDDPSGYEFLAPLDRLRYALETFSEYRTHTP
YLADMGLYQGHIIGAQIERAYLAMLENQFLPALMIGIMDDMNRAEEGSNVKLALLRVLRM
MSDASGRQPERVERFMAQRWQGYFPQRGEIQERLLTHLDYALEHSDLVGHIAEGQQLPAQ
AMAPLQGSIAAAQDELARQPIDERVYAALKAAGSRQGEPLDLRRSVGTLFDTVFMARSDN
PEHVRLPYLVTRDGFENYFLQELERATELALIDVWVLGQRDNINFSDADKQQLQTALREH
YVSDYHVSWRDALRDTQLVPLPDIHQAIVVADALVGAQRPLDRLLAAVERNTSLYPELPV
DDEQARKALQQSQRYQLALAIEQPFTPINQLSQERNDNPSSLEEIKTAVTELRDYLLEIE
ESGDAGRTAFINVRDRLSLRGNDPINNLQRIADNTPQPVGDMLHNLADQSWQLMMASATR
HLEHLWLDDVVAPYQERLAGRYPLAPGASREVALSDFEEFFAPDGILDAFYEESLKPFIE
GAPEYLVDAEGNSLLRDSLHTAIQQAEQIRRAYFSRDGVLDVEFALEPVSLSPDKRRSVI
SVDGQLIEYAHSASQRVSMIWPNTLRGGTESRVTMVPSEVNRSPRSVSQDGAWAWFRLLE
QADITSISERELELRFNVDGGTMRYRLFANGAPNPFTRPLAAGFQLPAALYAERGSNADQ
T
NT seq 3606 nt   +upstreamnt  +downstreamnt
atgtcgaaggcacagtcagcgcacaaccgggcccaggcacatggtaataaagccaaaggc
ctactgcggatctcaacgctgctgtgggcagtcctgctgattgtgttactggtcgcgatc
tggtggctagggcctagctgggaagtgcgaggtgtcatgcccctcgcgcccttaacgaat
cgtctattggccacgttggtagtggtcaccgtgattgccgtggtatggggagtccgcttg
gcgcgtcgtttacgggcgttggatgaagagcgtcaacaggaagacgcccgccaacaagac
ccgattatgtcgcaagtcgagcgtcaggaagcgtctcttaacagcgtgttaagcgagatt
accaatagtttgggaggtggtcatagcagccgctaccatctgccctggtacttggtaatg
ggggtcgaaaacgcgggcaaaaccagccttatcaatcgctccggccagaattttgcactc
acccacgtcatgaaggcatccggccaaagcagcaagcaagggcagcttggctttgactgg
tggattggcgataaagccgtattgatagaccctgacggagagctgttgacccaaggtgcc
atggaagggggcgagccgcaggcattgcagagcaggctgtgggatcactttgttgattgg
ttagagcgcaatcgcgcccagcggccgctggatggtgtggtgctggtgctggatcttgcc
cggttgagccacgctcaagtggcagtgcgcaaggcctatgccgcgctgctacgcagccgt
ctgcgagagctgatggagcgtcacggcactcgtctgccggtttacgtcacgttcagcaaa
atggatttgctacacggctttgatgacttctttcgccactactctcgcgaggcccgacgt
gcgccgcttggatttacctttaccccggcgtccatggaaacgccaggtaagtgggagtca
gagtttgagaccgactacgatgccatgctggcgcgtttgaatcagctgttaccgtccatg
ttgtcggagtgccgagaccgcgaagagcgcgaatcagtattccgttttgtacgccagttg
gcgggtctgcgcgatgtgttgttcggcttcttgaccgaggcgctatcaagcgaccgcttt
tcgactgccgccatggttcgcggtacttattttacttccgtgtatcagcaaggcgttccc
gaagacccctttgtggatgcggctgcccggcgttacggcatggatgacaatgttcagccc
gcccaccgcgctacgcgcagcgcactctactttaccgaggagctgttcgataaagttatc
taccccgaagcagggttggccggggataacgctagggtcacccagcggcggcggcgcaca
cgcaatatcagtctcgtcgcctgcttggtgatggggatggggcttatcggtggctgggcg
cacttctaccagaagaacagcgtgtctctcgcggccgtcgaagagcgggcagaaacattt
ttagcgactcagccggaggcgtttcaaagcgatgaccccagtggttatgagtttctagcg
ccattagacaggctgcgttatgcgttagagaccttctccgaataccgcacgcacacgcct
tacctggcggatatgggtctgtatcaagggcatatcattggtgcccaaattgagcgggct
tatctagccatgcttgaaaatcaatttctgcctgcactgatgattggcatcatggatgac
atgaaccgcgccgaagagggcagtaatgtcaaattagcgctgctgcgcgtgctgcgcatg
atgtcggatgccagcggccgtcaaccggaacgggtagagcgctttatggcccagcgctgg
cagggctattttccccagcggggcgagattcaagagcggctgttaacccacctggactat
gccttggagcatagcgatttagtgggccatattgctgaaggtcagcagcttcccgcccaa
gcgatggcgccgcttcagggcagtattgcagcggcccaagatgagttagcgcgtcagccg
atcgacgaacgtgtttacgccgcactcaaagccgcaggtagccgccaaggcgagccgctg
gatctacggcgcagtgtgggcacgttgttcgatacggtatttatggcgcgtagcgataac
cccgaacatgtgcgcttaccgtatctggtcacccgggatgggtttgaaaattatttctta
caagaacttgagcgggccacagaactggcactgatcgatgtgtgggtgcttgggcagcgc
gacaacatcaactttagtgatgctgataagcaacaactgcaaacggcgttacgcgagcat
tacgtcagcgattaccatgttagctggcgcgatgccctgcgcgatacgcaactggtcccc
ctgccggacattcatcaagccatcgtggtagctgatgctctggttggggcacagcgtccg
cttgatcggctgttggcagcggttgagcgcaataccagcctctaccctgaactacccgtt
gatgatgaacaggcgcgcaaagcgctgcaacagtcccagcgttaccagcttgcactcgcg
attgagcagccctttacgcctattaatcagttgagccaggaacgtaacgataatccgtca
tcgctggaggagattaaaaccgcggtaacagagctgcgtgactatttacttgaaattgaa
gaatcgggtgatgccgggcgtactgcttttatcaatgtgcgagaccggctctcgcttcgc
ggtaacgacccgattaataacttacagcgtattgcagacaacacgccccagccagtgggt
gacatgctgcataacttagccgatcagagctggcaactgatgatggcgagtgccacgcgc
cacttggagcacctctggcttgatgacgtcgttgcgccttaccaagagcgtctggctggc
cgctaccctctcgctcccggcgccagccgtgaagtggcgctaagcgactttgaagagttt
tttgcccccgacggcatcttggatgcgttttatgaagagagcttaaaaccctttattgaa
ggcgccccagagtacttagtagatgccgaaggcaactcactgcttcgcgatagcctgcat
acggccattcaacaggccgaacagattcgccgcgcctactttagccgtgacggtgtttta
gacgtggagtttgcccttgagcccgtcagcctaagtcccgataagcgacgcagtgtgatc
agcgtggatggccagttgattgaatatgcccacagcgccagccagcgtgtttcgatgatt
tggccgaacacactgcgcggcggtacagaaagccgcgtcaccatggtgcccagtgaggtt
aatcgctcaccccgcagcgtgagccaggacggcgcctgggcgtggttccggttattggag
caggccgatatcaccagtattagtgagcgtgaattggagctgcgcttcaatgttgacggc
ggcacgatgcgataccgtctatttgccaatggtgcgcctaatccctttacgcggccgcta
gcagcgggctttcaactgccggcagcgctctacgcggagcgaggtagcaatgctgaccaa
acttaa

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