Halomonas alkaliantarctica: QEN58_18895
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Entry
QEN58_18895 CDS
T09033
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
half
Halomonas alkaliantarctica
Pathway
half03420
Nucleotide excision repair
half03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
half00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QEN58_18895 (uvrD)
03430 Mismatch repair
QEN58_18895 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
half03400
]
QEN58_18895 (uvrD)
Enzymes [BR:
half01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QEN58_18895 (uvrD)
DNA repair and recombination proteins [BR:
half03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEN58_18895 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
QEN58_18895 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
T2SSE
Motif
Other DBs
NCBI-ProteinID:
WGI25371
LinkDB
All DBs
Position
4112207..4114405
Genome browser
AA seq
732 aa
AA seq
DB search
MDDVTAILDQLNSAQREAVSAPQGNLLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYALLA
VTFTNKAAKEMRTRLEALLSISMRHVWVGTFHSIAHRLLRTHWQDARLPQHFQIIDSDDQ
LRLVKRLLKDYSIDDERYPPRQVQHFISGCKEEGLRPHQVNVDGDAYMGQMVELYERYQL
TCERGGLVDFGELLLRSLELLRDNPALLKHYQERFGHVLVDEFQDTNTLQYAWLKLLTGM
KTPMTAVGDDDQSIYGWRGAKVENISRFEQEFPQTHTVRLEQNYRSTSAILEAANTLISH
NSERMGKNLWTDGIEGEPISIYAGFNDLEEARYIVDTIKEKVDEGFNRRDIAILYRSNAQ
SRLMEETLIRQGMPYRIYGGHRFYERLEIKNALAYLRLMLNRDDDASLERVINVPTRGIG
TRTVEIVRLRAREQGIQLWQALHDAINDGTLKGRAANAVQNFANLIEQLDNDASGMALHE
IIDHVTIHTGLIEHHKSERGEKGQARVENLEELVNAGRAFTQGDVFEAPEAGEGMAALEA
FLSEAALNAGDHEAEEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSLEEPGRLE
EERRLCYVGVTRAMQKLYLTHAETRRLHGKEVFPRPSRFLRELPPHLLEEVRLRGHISRP
VTASRSSFAQQSVESSGDMPSLHVGQGVEHPVFGEGIILNAEGEGARARVQVSFEGEGVK
WLVLGFAKLTPL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgattctcgatcagctcaactccgcccagcgcgaagcagtgagc
gccccccaaggtaatctgttggtactcgcaggcgcaggctcgggcaaaacccgcgtgctg
gttcatcgcattgcctggctgatgcaggccgaagggctgtcaccctacgcgctgctggcg
gtcacctttaccaataaagccgccaaggagatgcgcacccgcctcgaggcgctgctgagc
atatcgatgcgccatgtgtgggtaggcacctttcactccatcgcccaccgcctgctgcgc
acccactggcaggatgcccggctgccgcaacacttccagattatcgattctgacgatcag
ctacgcctggtcaaacggctgctgaaagattactcgatcgacgacgaacgctacccgccc
cgccaagtacagcactttatctccggctgtaaagaggaggggctacgcccacaccaagtc
aatgtggatggtgatgcctacatgggccagatggtcgagctctacgagcgctaccaactg
acctgcgagcgcggcggcctggtcgatttcggcgagctgctgttgagaagcctggagcta
ctgcgcgacaacccggcgctgcttaaacactatcaggagcgctttggtcatgtcctggtg
gatgagtttcaagataccaataccctgcaatacgcttggctgaaactgctcaccggcatg
aagacaccgatgaccgccgtgggtgatgacgaccagtcaatctatggctggcgcggtgcc
aaggtggagaatatcagccgctttgagcaggaattcccacaaacccataccgtgcgccta
gagcagaactatcgctccaccagcgcgattcttgaagccgccaataccctgatcagccac
aacagcgagcggatgggtaaaaatctgtggaccgacggcatcgaaggcgagccgatctcg
atctacgccgggtttaacgacctggaagaagcccgctatatcgtcgataccatcaaggag
aaggtcgacgaaggctttaaccgccgcgatatcgctattctttaccgctcaaacgcccaa
tcgcggctgatggaagagacgctgattcgccaaggcatgccctaccgtatttatggtggt
caccgcttctacgagcgcctggaaatcaagaatgccctggcctacctgcgcctgatgctc
aaccgcgatgacgacgcctcgctggagcgggtgatcaacgtacccacccgcggtattggc
acacgcacagtggagattgtccgcttacgtgcccgtgaacaaggcattcagctgtggcag
gcgctccacgatgcgattaacgacggcactttgaaaggccgcgcggccaatgccgtgcaa
aacttcgccaacctgatcgagcagctcgataatgatgcctccggcatggcgctgcacgaa
attatcgatcacgtcacgattcacacgggcctgatagagcaccacaaaagcgaacgcggc
gagaaaggccaggcgcgggtcgagaacttggaagagctggttaacgctggccgtgccttt
actcaaggcgatgtctttgaagcccccgaagcgggcgaaggcatggcggcactggaagcg
tttctttcagaagccgcccttaatgctggcgaccatgaagctgaagagtttgaagacagc
gtacagctgatgacgctgcactccgccaaaggcctggagtttcccgtcgtctttattgcc
ggtgtcgaggagggactctttccgcacaagatgtccttggaagagccgggtagactcgaa
gaggagcgtcggctctgttacgtcggcgtcacccgcgccatgcagaaactctacctcaca
cacgccgaaacccgccgcctgcacggcaaagaggtgtttccacgcccgtcgcgcttttta
cgcgagctaccgccgcacctgctcgaagaagtccgcctacgcgggcatatttcccgcccg
gtcaccgcatcacgctcctcctttgcccagcaaagcgtcgaaagtagcggagacatgcct
agcctccacgtcggccaaggcgttgagcacccggtgttcggcgaagggattattcttaac
gcggaaggcgaaggtgcccgcgcccgtgtgcaggtcagctttgaaggggaaggggtgaaa
tggctggtacttggctttgccaagctaacgccgctgtag
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