Halorarum halophilum: HUG10_01115
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Entry
HUG10_01115 CDS
T06682
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halg
Halorarum halophilum
Pathway
halg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG10_01115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halg03021
]
HUG10_01115
Transcription machinery [BR:
halg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HUG10_01115
Prokaryotic type
Archaeal type
TFB
HUG10_01115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
A2L_zn_ribbon
HTH_Tnp_ISL3
Zn_ribbon_Elf1
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QLG26223
UniProt:
A0A7D5L2J5
LinkDB
All DBs
Position
complement(206751..207719)
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AA seq
322 aa
AA seq
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MSEKTNARRQTTEQERTERETTDETLSCPECNGNVIQDEEHGETVCEECGLVVEEDSVDR
GPEWRAFDAAEKDQKSRVGAPTTNTMHDKGLSTNIDWRDQDAYGRSLGSRQRQKMRRLRK
WNERFRTRDSKERNLKQALGEIDRMSSALGLPDNVRETASVIYRRALEEDLLPGRSIEGV
STACTYAAARMAGVPRSLDEISDVSRVEKDEVARTYRYVVRELKLEVKPADPEQYVPRFA
SALGLSDEAERRAKELLRNAKQKGVHSGKSPVGLAAAAVYAAALLCNEKTTQAAVSDVAD
ISEVTIRNRYHELLEAEEGLVA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaaaacaaacgcccgtcgacagacgaccgaacaggagcggaccgaacgagag
acgaccgacgagacgctatcgtgcccggagtgtaacggtaacgtcatccaggacgaggag
cacggcgagaccgtctgcgaggagtgcggactcgtcgtcgaggaggactccgtggaccgc
gggccggagtggcgcgcgttcgacgccgccgagaaggaccagaagagccgcgtcggcgcc
ccgacgacgaacacgatgcacgacaagggcctgtcgaccaacatcgactggcgcgaccag
gacgcctacggacggtcgctcggctcccgccagcgccagaagatgcggcggctccgcaag
tggaacgagcggttccggacgcgcgactcgaaggagcgcaacctcaagcaggcgctcggc
gagatcgaccggatgtcgagcgcgctcggcctccccgacaacgtccgcgagaccgcctcc
gtcatctaccgtcgcgcgctcgaggaggacctcctgccggggcgctccatcgagggcgtc
tccacggcctgcacgtacgccgccgcgcggatggccggcgtgccgcggtcgctcgacgag
atctcggacgtctcccgcgtcgagaaggacgaggtcgcccggacgtaccgctacgtcgtc
cgcgaactgaagctggaagtgaagcccgccgaccccgagcagtacgtcccgcggttcgcc
tccgcgctggggctctccgacgaggccgagcgccgcgcgaaggagctcctgcggaacgcg
aagcagaagggcgtccactccgggaagtcccctgtcggcctcgccgcggccgccgtctac
gccgccgcgctcctctgcaacgagaagacgacccaggcggccgtctcggacgtcgcggac
atatccgaggtcacgatccgcaaccggtaccacgaactcctcgaggccgaggaaggcctc
gtcgcctga
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