Halorarum halophilum: HUG10_01465
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Entry
HUG10_01465 CDS
T06682
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
halg
Halorarum halophilum
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halg03400
]
HUG10_01465
DNA repair and recombination proteins [BR:
halg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HUG10_01465
Archaeal homologous recombinant proteins
HUG10_01465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_21
AAA_27
AAA_13
AAA_29
DUF1664
DUF3090
GAS
ABC_ATPase
FapA
ABC_tran
Snapin_Pallidin
ZnF_RZ-type
Zn_ribbon_3
DUF3584
Motif
Other DBs
NCBI-ProteinID:
QLG26287
UniProt:
A0A7D5GIM4
LinkDB
All DBs
Position
complement(280710..283400)
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AA seq
896 aa
AA seq
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MRFDRVRLRNFKPYADTDLRLSEGVTVIHGLNGSGKSSLLEACFFALYGSAGLDGTLEDV
VTNGADETEVELWFTHEGESYHIHREVKRYGDQIQTTTCTLEGNDGTVTRDGATEVRSFV
VDLLRMDAEAFVNCAYVRQGEVNKLINATPSGRQDMIDDLLQLGKLEEYRERAADARLGV
EDVLGEKRGALSTVADQLEEKEEADLHDRLNGLQSDLKELDANVERYEEQRSKAESTREE
ARDVLDRYEEKREELESVEADIEELESAIREGEAEREELASTVGETRDRLATLREKLSER
VAETQLDEASEAAIEERRAELDEREADLRADRDEARNEATAFENQSTNLAERADDDAKRA
DEKRDEAGTLDDDVESARETLSEREDSLSELDAEREELEATFEDAPVGPGEAESHRDGVR
EELDDLRDDVTEVTASLSTARASVEEAEALLEEGKCPECGQPVDDSPHVDTLAEDRERVS
DLEDELADLRERESELESELARAEELVEAGNRIGELESTRRLVEDGIEEKRAEIEEKRDR
AETLREEAGELDDRAEEKREIAERKAEQAEAARDRVAEIDEELEELDADRDRIDGVESTR
EAIADAETEIERLEERRSDLADRNGERREFLAGKRDRRDELREGFDEDQVETARERLSNA
ESYIEQVSGTLEQLAERRDELTSAIGAVERELDELEELRERHDDLAERVAALESVHEESE
ELEAMYGDLRAELRRRNVESLERMLNETFDLVYANDAYSHIELDGEYALTVYQKDGEPLD
PEQLSGGERALFNLSLRCAIYRLLAEGIEGAAPTPPLILDEPTVFLDSGHVSRLVDLVDE
MRGFGVRQILIVSHDDELVGAADDLVRVEKNPTTNRSSVERTDEASLADLDAVADD
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcgaccgcgtgcgcctgcggaacttcaagccgtacgccgacaccgacctccgg
ctctccgagggcgtgacggtcatccacgggctgaacgggagcgggaagtcctcgctgctg
gaggcgtgtttcttcgccctctacggatcggctggactcgacggaacgctcgaggacgtc
gtgaccaacggtgccgacgagaccgaggtcgaactctggttcacccacgagggcgagtcc
taccacatccaccgcgaagtgaagcggtacggcgatcagatccagacgacgacgtgcacc
ctggaggggaacgacggcacggtaacacgggacggcgcgaccgaggtccggtcgttcgtg
gtcgacctgctccgcatggacgcggaggcgttcgtcaactgcgcgtacgtccggcagggc
gaggtgaacaagctcatcaatgcgacgccgagcgggcgtcaggacatgatcgacgacctg
ctccagctcgggaagctcgaggagtaccgcgagcgggcggccgacgcgaggctcggcgtc
gaggacgtgctcggcgagaagcgcggcgcgctctcgacggtggccgaccagctcgaggag
aaggaggaggccgacctccacgaccgactgaacgggctccagtccgacctgaaggaactg
gacgcgaacgtcgagcgctacgaggaacagcgttcgaaggcggagtcgacccgagaggag
gctcgcgacgtcctcgaccggtacgaggagaaacgggaggagctcgagtcggtcgaggcg
gacatcgaggagctcgagtccgcgatccgcgagggagaggccgagcgcgaggaactcgcc
tcgacggtaggtgagacacgcgaccggctggcgacactgcgggagaagctctctgagcgg
gtcgcggagacccagctcgacgaggcgtccgaagcggcgatcgaggaacggcgggccgag
ctggatgaacgcgaagccgacctccgcgccgaccgtgacgaggcccggaacgaggccacg
gcgttcgagaaccagtcgacaaacctcgccgagcgcgccgacgacgacgcgaagcgcgcc
gacgagaagcgcgacgaggcggggacgctcgacgacgacgtggagtcggcacgggagacg
ctctcggagcgggaggactccctctccgagctcgacgccgaacgcgaggagctggaggcg
acgttcgaggatgcgcccgtcggaccgggcgaggccgagtcacaccgcgacggcgtccgc
gaggaactcgacgacctcagggacgacgtcaccgaggtcacggcgtcgctctcgaccgcg
cgagccagcgtcgaggaggccgaggcgctcctcgaggaggggaagtgccccgagtgcggc
cagccagtagacgactccccgcacgtggacacgctcgccgaggatcgcgaacgcgtgagc
gacctggaggacgagctggcggacctgcgggaacgcgagtccgaactcgagtccgaactc
gcccgcgcggaagagctcgtcgaggccgggaaccgcatcggcgaactggagagcacgcgc
cggctcgtcgaggacggcatcgaggagaagcgcgccgagatcgaggagaagcgggaccgc
gccgagacgctccgcgaggaggccggggaactcgacgaccgggccgaggagaaacgcgag
atcgcggaacggaaggccgagcaggccgaggcggcccgcgatcgggtcgccgaaatcgac
gaagagctggaggagctcgacgccgaccgcgaccggatcgacggtgtcgaatcgacgcgc
gaggccatcgccgacgcggagaccgagatcgaacgcctggaggagcgccggtcggacctc
gcggaccggaacggcgagcggcgggagttcctcgcggggaagcgcgaccggcgcgacgaa
ctccgggaggggttcgacgaggaccaggtcgagacggcgcgcgagcgtctctcgaacgcc
gagtcgtacatcgagcaggtgtcggggacgctggagcaactcgccgagcgtcgggacgaa
ctcacgagcgccatcggcgccgtcgagcgcgaactggacgaactggaggagctccgggag
cgccacgacgatctggccgagcgggtcgccgcgctcgaatcggtccacgaggagtcggag
gagctcgaggcgatgtacggcgacctccgggcggagctccgccgccggaacgtcgagagc
ctcgaacggatgctcaacgagacgttcgacctcgtgtacgccaacgacgcctactcgcac
atcgaactggacggcgagtacgcgctcaccgtctaccagaaggacggcgagccgctcgac
cccgaacagctctcgggcggggaacgcgcgctgttcaacctctcgctcaggtgtgccatc
taccgcctcctcgcggagggaatcgagggtgcggcgccgacgccgccgctcatcctcgac
gagccgaccgtgttcctcgactcgggccacgtctcccggctggtcgacctggtcgacgag
atgcgtggcttcggcgtccggcagatcctcatcgtgagccacgacgacgaactcgtcggc
gcggccgacgacctcgtgcgggtggagaagaacccgacgacgaaccgatcgtccgtcgag
cgaaccgacgaggcgtcgctcgcggacctcgacgccgtcgccgacgactga
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