Halorarum halophilum: HUG10_03465
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Entry
HUG10_03465 CDS
T06682
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
halg
Halorarum halophilum
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halg03000
]
HUG10_03465
Transcription factors [BR:
halg03000
]
Prokaryotic type
Helix-turn-helix
Other families
HUG10_03465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF_2
BAT
PAS_4
PAS
PAS_9
GAF
PAS_8
HTH_10
PAS_3
PAS_7
GAF_3
Diguanyl_cycl_sensor
bHLH-MYC_N
Sigma70_r4
Sigma70_r4_2
HTH_17
HTH_24
HTH_AsnC-type
HTH_11
GerE
HTH_5
HTH_23
SpoVT_C
HTH_Crp_2
GAF_NLP
MarR_2
UPF0122
MarR
Motif
Other DBs
NCBI-ProteinID:
QLG26656
UniProt:
A0A7D5KEA6
LinkDB
All DBs
Position
657460..661209
Genome browser
AA seq
1249 aa
AA seq
DB search
MCDQPDRVLYADPNEGRAERVRHHLETGGERRVTVVRTVEEIRDVIDDEYACVILTPDVA
ADDPCSLLSAVADEYPTVNSILLSELDSPVLFERAYDVGVDEVVHYTGEEAARILDHHVG
KFATDEESGVSLSPTHLEELMDVTEDAVVTIDARSRILYANPAVESVFGYTPEELVGESL
TEIMSDEFARKHSEGIRRYLETGERTLDWANVELPCRHKDGHSVPLSISFSEFTVDGKRY
FTGIMRDVTERKRHLAERRLLHETSQRILHAETFEDGLEIALNEVGDAMNWAYGEAWVLG
ENGERLERAPGEYVTTDESSEFAEGARSTTFERGEGLPGRCWETGEPEWIADLTDDGGFE
RATTAHEAGLHTALAVPIVADGDVVAVLVFMLPEAREVDEGMIEVTATVAADLGRLMQRL
RVETDLREERALKDLILETSPVGILILDDEGTFKYLNGHAREMLGLAADEPAPSYDALDI
ELLDAKGDRLGEDGRPYRTVIEDRSPVAGEFRLRIDGEDRWLSASGVPMVEGSDEVTAAV
FSIQDLTERKRREQQLVQYETVMQTVSDGIYAVDEDGRFVAVNDAYTALVGHSRDELLGR
RADEVVSDSVIAKARRLQEELLEGDDEVTTLETTITTADGRVVPIEVRISLFPLGDDRFG
RVGVVRDITERRRREERLALLNEVAQSLTGAETYEEVTDIVLEAASETLGLPLTSVEFYD
EERGHLVPTARTEGVVDLVGTGPLFESTRGIPWRAYAGSEQLVYDDLRAEQDVPDGETPL
RSAIVVPIGKYGVFVSGATEPDAIGETEVTVANILAANVHAALDRVDREQELRARKDRLE
EQNDTLERVNRINRVIRSITQSLTQATSREDIVEAVCRELTEDGPYAFSWVAERTSVTGN
EVTASASAGAGDGYLDGIGVSVDGDDEEGTDPTGRAFRTHEIQVQNDLHTDPPFEPWRSR
AIEHGFRSSVAVPLTYGETLYGVLNVYAARAGMFEEMEASVLEELGEMVGYAINAMERKK
LLVSDSAVELEFELSDPSIPAIRFARETGGTFEFDEFVQGVDGSFRVFFTVSGADPETVY
EFADRIDSVTGVSLISERDGAVRFEANVSESGYLGKLVSYGAHPRSMSATPDGGRVTVEL
PRSGDLQSFIRMFLDTFEGSELVARRERDRPIRTRKEFQAVYKERLTERQEEVMKTAYFS
GFFEWPRHKTGQEIAEMLGVSQPTVNRHIRTGERKLLDVAFEDDDPPGG
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtgaccaacccgaccgagtgctctacgcggacccgaacgaaggacgcgccgaacgg
gttcggcaccacctcgaaacgggcggggagcgtcgcgtcacggtagtccggacggtcgag
gagatccgggacgtgatcgacgacgagtacgcgtgcgtgattctcacgcccgacgtcgcc
gccgacgacccctgctcgttgctctccgcggtggccgacgagtacccgacggtcaactcc
atcctcctgtcggaactcgactcgccggtcctgttcgaacgagcctacgacgtcggcgtc
gacgaggtggtccactacacgggcgaggaggcggcccgtatcctcgatcaccacgtcggg
aagttcgccaccgacgaggagtcgggggtctccctgtcccccacacacctcgaggagttg
atggacgtgacggaggatgccgtcgtcaccatcgacgcacggagccggatactgtacgcg
aaccccgccgtggagtcggtgttcggctacacgccggaggaactcgtcggcgagtcgttg
acggagataatgagcgacgagttcgcccggaagcacagcgaggggatacggcggtacctc
gagacgggggagcggacgctcgactgggccaacgtcgaactcccctgtcgacacaaggac
ggccacagcgtccccctcagcatctcgttctcggagttcaccgtggacgggaagcggtac
ttcaccggcatcatgcgggacgtcaccgagcggaaacggcaccttgcggagcggagactc
ctccacgagacgagccagcgcatcctccacgccgagaccttcgaggacgggctcgaaatc
gccctgaacgaggtcggcgacgcgatgaactgggcgtacggcgaggcgtgggtgctgggc
gagaacggggaacgcctcgaacgcgcaccgggggagtacgtcacgaccgacgagtcgagc
gagttcgcggagggtgctcgctcgaccaccttcgaacgcggcgagggactgcccggccgc
tgctgggagacgggcgaaccggagtggatcgccgatctgaccgacgacggcggcttcgag
cgggcgacgaccgcgcacgaggctggcctccacaccgccctcgccgtgccgatcgtcgcg
gacggcgacgtggtcgcagtgctcgtgttcatgctacccgaggcgcgcgaggtcgacgag
gggatgatcgaggtgacggcgacggtcgcggccgacctcggccggctcatgcagcggctc
cgggtcgagaccgatctccgcgaggagcgggcgctgaaggatctgatcctcgagacgagt
ccggtcgggatcctcatcctcgacgacgagggcacgttcaagtacctgaacgggcacgcg
agggagatgctcggcctcgccgccgacgagccggcaccttcgtacgacgcgctcgacatc
gaactcctcgacgccaagggggaccggttgggcgaggacggtcggccgtaccggaccgtc
atcgaggatcggagtccggtcgccggcgagttccgcctccggatcgacggcgaggaccgg
tggctctcggcgagcggcgtcccgatggtcgagggatcggacgaggtcaccgcggcggtg
ttctctatccaggacctcaccgagcggaagcgacgggagcagcagctcgtccagtacgag
acggtgatgcagacggtgagcgacggcatctacgcagtcgacgaggacgggaggttcgtc
gcggtcaacgacgcctacacggcgctcgttggacacagccgcgacgaactgctcgggcga
cgcgccgacgaggtcgtctccgacagcgtgatcgcgaaagcccgccgcctccaggaggag
ctgctggagggcgacgacgaggtgacgaccctggagacgacgatcacgaccgcggacggg
cgcgtcgtcccgatcgaggtgcggatctccctgttcccgctcggcgacgatcgcttcggc
cgggtcggggtcgtccgtgacatcaccgagcgtcgacggcgggaggaacggctcgcgctg
ttgaacgaggtggctcagtccctgacgggtgccgagacgtacgaggaggtgacggacatc
gtgctggaggccgcgtccgagaccctcggcctcccgctcacgagcgtcgagttctacgac
gaggagcgcggccacctcgtcccgacggcgcggaccgagggggtcgtcgacctcgtcggg
acggggccgctcttcgagtctaccagggggatcccctggcgcgcctacgccgggagcgag
caactcgtctacgacgatctgcgggcggaacaggacgtcccggacggcgagaccccgctg
cggagcgccatcgtcgtccccatcggaaagtacggcgtcttcgtctcgggtgcgacggag
ccggacgccatcggcgagacggaggtgacggtcgcgaacatcctcgccgcgaacgtacac
gcggctctggaccgggtcgatcgggaacaggagctccgcgcgcggaaggaccgcctcgag
gaacagaacgacacgctcgaacgggtcaaccggatcaaccgcgtcatccgaagcatcacg
cagtcgttgacgcaggcgacgtcccgggaggacatcgtcgaggcggtctgtcgggagctg
acggaggacgggccgtacgcgttcagctgggtcgcggagcggacgagcgtcaccgggaac
gaggtgaccgcgagcgcgtccgccggcgcgggcgacggctacctcgacgggatcggcgtc
tcggtcgacggggacgacgaggagggtaccgacccgacgggacgcgcgttccggacccac
gagatccaggtccagaacgacctccacaccgacccgccgttcgagccgtggcggtcgagg
gccatcgagcacggcttccgatcgagcgtcgccgtcccgctgacgtacggtgagacgctg
tacggcgtgttgaacgtctacgccgcccgggcggggatgttcgaggagatggaggcgtcc
gtcctcgaggaactcggggagatggtcggctacgccatcaacgcgatggagcggaagaag
ctcctggtgagcgactcggccgtcgaactcgagttcgaactgtcggacccgtccatcccg
gccatccggttcgcgcgcgagacgggcgggacgttcgagttcgacgagttcgtccagggg
gtcgacgggagcttccgggtgttcttcaccgtctcgggcgccgacccggagacggtctac
gagttcgcggaccggatcgactccgtgaccggggtgtcgctcatctccgagcgggacggg
gccgtccgcttcgaggcgaacgtctccgagtccggctacctggggaaactggtctcgtac
ggggcgcacccgaggagcatgtcggccacgccggacggcggcagggtgaccgtcgaactc
ccgcgcagcggggacctccagtcgttcatccgcatgttcctcgatacgttcgagggctcg
gaactcgtcgccagacgggaacgggaccggccgatcaggacccgcaaggagttccaggcc
gtgtacaaggaacgcctcacggagcggcaggaggaggtgatgaagacggcgtacttcagc
gggttcttcgagtggccccgccacaagaccggacaggagatcgcggagatgctcggcgtc
tcccagccgaccgtgaaccggcacatccggacgggcgaacgcaaactgctggacgtcgcg
ttcgaggacgacgaccccccggggggttaa
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