Halorarum halophilum: HUG10_05000
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Entry
HUG10_05000 CDS
T06682
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
halg
Halorarum halophilum
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halg03400
]
HUG10_05000
Enzymes [BR:
halg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HUG10_05000
DNA repair and recombination proteins [BR:
halg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HUG10_05000
Prokaryotic type
HUG10_05000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QLG26936
UniProt:
A0A7D5KEM9
LinkDB
All DBs
Position
complement(944232..945650)
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AA seq
472 aa
AA seq
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MRVFWHRRDLRIADNRGLAAAAADDTVLPAFVVDDGVLEHAGATRVRFMLDALASLRATY
RGLGSDLLVVRGDPTEELPRLASHHDADGVYWNEDYSGLARERDAAVRRSLEDDGLVARA
FHDAVHHEPGTITTNEGEPYSVYSYFWKKWRDRSKADPYPAPGPESLVPADDLPADPLPD
LDDLGFAEPDAVLQRVGTDAAHDRLDAFLDGPIYEYQEAREYPAREGTSRLSADLKWGTI
GVREVSEAVEAAAADAPDDGAAESVEEFRSQLAWREFYAQVLWANPNVVSENVRTYERPI
EWREDPEALRAWKVGETGFPIVDAGMRQLREEAYMHNRVRMIVASFLTKDLRVDWREGYA
HFRELLVDHDAANDSCGWQWAASTGTDAQPYFRVFNPTTQGERYDPDAEYIREYVPAFEG
IPAEEVHGWPDLTDEQRERTADHPHPIVDHAEAREAAIGMFERARGDDGSGG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcttctggcaccggcgggacctccggatcgccgacaaccgggggctggccgcg
gccgcggccgacgacaccgtcctcccggccttcgtcgtcgacgacggcgtcctggaacac
gcgggcgcgacccgcgtccggttcatgctggacgccctcgcctcgttgcgcgcgacgtac
cgcggtctcggttcggacctcctcgtcgtccgcggtgacccgacagaggagcttccccgg
ctcgcctcccaccacgacgccgatggagtgtactggaacgaggattactccgggctcgcg
cgcgagcgcgatgcggcggtccgacggtcgctggaggacgacggcctcgtcgcgagggcg
ttccacgacgccgtccaccacgaacccggaacgatcacgacgaacgaaggggagccgtac
tcggtgtacagctacttctggaagaagtggcgcgaccggagcaaggcggacccgtacccg
gcgcccggcccggagtcgctcgtgccggccgacgacctccccgccgacccgctccccgat
ctcgacgacctcggcttcgcggagcccgacgcggtcctgcagagggtcgggaccgacgct
gcccacgatcggctcgatgccttcctcgacggacccatctacgagtaccaggaggcgcgt
gaatacccggcgagagaggggacttcgcggctctcggcggacctcaagtgggggacgatc
ggcgtgcgcgaggtgtccgaggccgtcgaggcggccgcggcggacgcgcccgacgatggc
gccgccgagtcggtcgaggagttccgctcgcaactcgcctggcgggagttctacgcgcag
gttctatgggcgaacccgaacgtcgtgtccgagaacgttcggacgtacgaacgccccatc
gagtggcgcgaggaccccgaagcgctgcgggcgtggaaggtcggcgagacggggtttcct
atcgtcgacgcgggaatgcggcagcttcgcgaggaggcgtacatgcacaaccgggtccgg
atgatcgtcgcgtcgttcctcacgaaggacctccgggtcgactggcgggaggggtacgcc
cacttccgcgagttgctcgtggaccacgacgccgccaacgactcctgtggctggcagtgg
gccgcctcgaccgggaccgacgcccagccgtacttccgcgtgttcaacccgacgacccag
ggcgagcgctacgaccccgacgccgagtacatccgcgagtacgtccccgcgttcgagggg
atcccggccgaggaggtccacggctggcccgacctcaccgacgagcagcgcgagcggacg
gccgaccacccgcacccgatcgtcgaccacgccgaggcgcgcgaggcggccatcgggatg
ttcgagcgagcccgcggggacgacgggtcgggcgggtag
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