KEGG   Halorarum halophilum: HUG10_06305
Entry
HUG10_06305       CDS       T06682                                 
Name
(GenBank) transcription factor
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
halg  Halorarum halophilum
Pathway
halg03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:halg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HUG10_06305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:halg03021]
    HUG10_06305
Transcription machinery [BR:halg03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     HUG10_06305
 Prokaryotic type
  Archaeal type
    TFE
     HUG10_06305
SSDB
Motif
Pfam: TFIIE_alpha Sigma70_r3 DNA_ligase_ZBD Rad50_zn_hook Zn_ribbon_3 Zn_ribbon_TFIIB
Other DBs
NCBI-ProteinID: QLG27175
UniProt: A0A7D5KL32
LinkDB
Position
complement(1202955..1203494)
AA seq 179 aa
MAFEELLEDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLASYRRVRDEDSGWLTYLWTFEYDNVPENLEEEMYRLLEGLEQRQSYEDDHQFYLCE
VDSIRFEFEEAMEFGFECPECGSPLESMENSRLVEAMEWRIDQLRDELNVDHDDTEAGA
NT seq 540 nt   +upstreamnt  +downstreamnt
atggcttttgaggaactcctggaggacccggtcatccagaagtacctccacgaactcgtc
ggccccacgggcatgcccgtcgcggcggcgccgccggacggggaggtaaccgacgaggaa
ctcgcggaggagctgggactggagctgaacgacgtgcgccgggcgctgttcatcctgtac
gagaacgacctcgcctcctaccggcgggtccgcgacgaggactccgggtggctgacctac
ctctggacgttcgagtacgacaacgtcccggagaacctcgaggaggagatgtaccggctg
ctcgaggggctcgagcagcggcagtcctacgaggacgaccaccagttctacctctgtgag
gtggactccatccgcttcgagttcgaggaggcgatggagttcggcttcgagtgccccgag
tgcgggtcgcccctcgagtcgatggagaacagccggctcgtcgaggcgatggagtggcgc
atcgaccagctccgcgacgaactgaacgtcgaccacgacgacaccgaggccggcgcgtaa

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