Halorarum halophilum: HUG10_06305
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Entry
HUG10_06305 CDS
T06682
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
halg
Halorarum halophilum
Pathway
halg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG10_06305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halg03021
]
HUG10_06305
Transcription machinery [BR:
halg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
HUG10_06305
Prokaryotic type
Archaeal type
TFE
HUG10_06305
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Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
DNA_ligase_ZBD
Rad50_zn_hook
Zn_ribbon_3
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QLG27175
UniProt:
A0A7D5KL32
LinkDB
All DBs
Position
complement(1202955..1203494)
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AA seq
179 aa
AA seq
DB search
MAFEELLEDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLASYRRVRDEDSGWLTYLWTFEYDNVPENLEEEMYRLLEGLEQRQSYEDDHQFYLCE
VDSIRFEFEEAMEFGFECPECGSPLESMENSRLVEAMEWRIDQLRDELNVDHDDTEAGA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggaactcctggaggacccggtcatccagaagtacctccacgaactcgtc
ggccccacgggcatgcccgtcgcggcggcgccgccggacggggaggtaaccgacgaggaa
ctcgcggaggagctgggactggagctgaacgacgtgcgccgggcgctgttcatcctgtac
gagaacgacctcgcctcctaccggcgggtccgcgacgaggactccgggtggctgacctac
ctctggacgttcgagtacgacaacgtcccggagaacctcgaggaggagatgtaccggctg
ctcgaggggctcgagcagcggcagtcctacgaggacgaccaccagttctacctctgtgag
gtggactccatccgcttcgagttcgaggaggcgatggagttcggcttcgagtgccccgag
tgcgggtcgcccctcgagtcgatggagaacagccggctcgtcgaggcgatggagtggcgc
atcgaccagctccgcgacgaactgaacgtcgaccacgacgacaccgaggccggcgcgtaa
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integrated database retrieval system