Halorarum halophilum: HUG10_06620
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Entry
HUG10_06620 CDS
T06682
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
halg
Halorarum halophilum
Pathway
halg03022
Basal transcription factors
halg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG10_06620
09124 Replication and repair
03420 Nucleotide excision repair
HUG10_06620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halg03021
]
HUG10_06620
03036 Chromosome and associated proteins [BR:
halg03036
]
HUG10_06620
03400 DNA repair and recombination proteins [BR:
halg03400
]
HUG10_06620
Enzymes [BR:
halg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HUG10_06620
Transcription machinery [BR:
halg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HUG10_06620
Chromosome and associated proteins [BR:
halg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HUG10_06620
DNA repair and recombination proteins [BR:
halg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HUG10_06620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
AAA_16
nSTAND3
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QLG29439
UniProt:
A0A7D5K9Y6
LinkDB
All DBs
Position
1257862..1260234
Genome browser
AA seq
790 aa
AA seq
DB search
MSESVTEAEDWRAVFGHSNPYPEQEDGVEAAVAAARDGGYLALEGACGTGKTMLALTAGI
HLVRDPDSDFERVFVLTSVKQQLRQFEQDLETINADLPDDWRPVSAMTLVGKADVCPYAR
ENRAGIDDSNMYDRCEGLRERTRALTGEGGDATAGALVQQARRAQTGIADSGEAGVSYLE
TAGEPTPYLPQMPEHGGGATGEGTEYCPFYAQFLEDLPEDGDPVEAVPFDFADAGLVDAE
ELVRLSAGNGTCPHSMMGALVPEVEVVVGNYYHAFDPVTAATFTGALLDDSTFVVCDEAH
MLEPRVRDLVSDGVGDGTLRDAENELTRVIQPVAFEDEGKRARGTTDAELVRGELSDAEV
SLSELELVRDFVRDLREEVDRRVTAHLDSEHRGWRADLTNLHDAEVPLRDPEEPAEDELS
EWARDAGYGEKVWARAETVGAVVARILNEAEEEETQRAAPAVGRLLNAWYRLDHESYFRE
LELERTWDETEPADSWRRAYNARLALHNCVPADAIGERIADFGGGVLMSATLAPLDVFRE
VTGLNYLESEGRPVEERTYGLTFPERNRASFAIDAPKFTYGNRGPPGEENETREAHADAV
VEVVRTTPGNVLVGMPSYGEAEWVAGVLDERTDAPVLLDESSADKATEELKAEFFGGEGK
TLVTSIRGTLTEGVDYRGDRLSAAVICGVPIINTASPRTKAVKTAYDREFGNGFETALTV
PAVRKARQAIGRVIRGPEEVGVRVLVDARYARDSWNSVREYFPEPAREEFRPVSPDMLRF
GLERFWDGQE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagagcgtgaccgaggccgaggactggcgagcggtgttcgggcattcgaacccg
taccccgaacaggaggacggggtcgaggcggccgtcgctgcggcgcgggacggcgggtac
ctggcgctggagggggcctgtggcacggggaagacgatgctcgcgctcaccgccggcatc
cacctcgtccgcgacccggactccgacttcgagcgcgtgttcgtgctcacgagcgtcaag
caacagctccgccagttcgaacaggacctggagacgatcaacgccgacctcccggacgac
tggcggcccgtctcggcgatgacgctcgtcgggaaggcggacgtctgcccgtacgcccgg
gagaaccgggccggcatcgacgactcgaacatgtacgaccgctgcgaggggttgcgcgag
cggacccgggcgctgaccggggagggcggtgacgcgaccgcgggcgcgctcgtccagcag
gccagacgcgcccagaccggcatcgcggactcgggcgaggcgggcgtctcctacctcgaa
accgcgggggagccgacgccgtacctcccccagatgcccgagcacggcggcggcgcgacg
ggcgaggggactgagtactgcccgttctacgcccagttcctcgaggacctcccggaggac
ggcgaccccgtcgaggcggtgccgttcgacttcgccgacgccgggctcgtcgacgccgag
gaactcgtcaggctgtcggcgggcaacgggacctgtccgcactcgatgatgggggcgctc
gtccccgaggtcgaggtcgtcgtcggcaactactaccacgcgttcgaccccgtgacggcc
gccacgttcaccggcgcgctgctcgacgactcgacgttcgtcgtctgcgacgaggcgcac
atgctcgaaccgcgcgtccgtgacctcgtctccgacggcgtcggcgacggaacgctccgg
gacgccgagaacgaactcacccgcgtcatccagcccgtcgccttcgaggacgaggggaag
cgcgcccgggggacgaccgacgcggaactcgtccggggggagctctccgacgcggaggtg
agcctgagcgaactggaactcgtgcgcgacttcgtccgcgacctccgcgaggaggtggac
cgacgcgtgaccgcccacctcgacagcgagcaccggggctggcgcgcggacctgacgaac
ctgcacgacgccgaagtccccctccgtgaccccgaggaaccggcggaggacgaactctcc
gagtgggcccgcgacgccggctacggcgagaaggtgtgggcgcgcgccgagaccgtcggc
gccgtcgtggcgcggatcctcaacgaggccgaggaggaggagacccagcgcgctgcgccg
gcggtgggccgcctgctgaacgcctggtaccggctcgaccacgagtcgtacttccgggaa
ctcgaactggagcggacgtgggacgagacggagccggccgactcctggcgccgggcgtac
aacgcccggctggcgctccacaactgcgtccccgcggacgccatcggcgagcgcatcgcg
gacttcggcggaggggtgctcatgtccgcgacgctcgcaccgctcgacgtgttccgcgag
gtgaccgggctgaactacctcgaatccgagggccgcccggtcgaggagcggacctacggg
ctcacgttccccgagcggaaccgggcgtcgttcgcgatcgacgcgccgaagttcacctac
ggcaaccgcgggccgccgggcgaggagaatgagacgcgcgaggcccacgcggacgccgtc
gtcgaggtggtccggacgacgcccgggaacgtgctcgtcgggatgccgagctacggcgag
gccgagtgggtggccggcgtgctggacgagcgaaccgacgcgccggtgctgctggacgag
tcgagcgccgacaaggcgaccgaggagttgaaggccgagttcttcggcggcgaggggaag
acgctcgtgacgagcatccgcgggacgctcaccgagggggtcgactaccgcggcgaccgg
ctctcggccgcggtgatctgcggggtgccgatcatcaacacggcctcgccgcggacgaag
gccgtgaagacggcgtacgaccgcgagttcgggaacgggttcgagacggcgctcacggtg
ccggcggtccggaaggcccgacaggcgatcgggcgggtcatccgcggtcccgaggaggtc
ggcgtccgcgtgctcgtggacgcccgctacgcccgcgactcgtggaactcggtgcgcgag
tacttccccgagcccgcccgggaggagttccggccggtcagcccggacatgctccggttc
gggctggaacggttctgggacggacaggagtga
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