Halorarum halophilum: HUG10_09005 Help Entry HUG10_09005       CDS       T06682                                  Name (GenBank) CDC48 family AAA ATPase   KO K13525   transitional endoplasmic reticulum ATPase Organism halg  Halorarum halophilum Pathway halg04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:halg00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     HUG10_09005  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:halg03019]     HUG10_09005    03009 Ribosome biogenesis [BR:halg03009]     HUG10_09005    04131 Membrane trafficking [BR:halg04131]     HUG10_09005   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:halg04147]     HUG10_09005 Messenger RNA biogenesis [BR:halg03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      HUG10_09005 Ribosome biogenesis [BR:halg03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     HUG10_09005 Membrane trafficking [BR:halg04131]  SNARE   SNARE associated proteins    Others     HUG10_09005  Autophagy   Aggrephagy    Other aggrephagy associated proteins     HUG10_09005 Exosome [BR:halg04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    HUG10_09005 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N CDC48_2 AAA_16 RuvB_N AAA_5 TIP49 AAA_22 AAA_33 AAA_2 AAA_14 nSTAND3 NPHP3_N RNA_helicase IstB_IS21 AAA_28 AAA_7 Mg_chelatase Sigma54_activat AAA_18 ABC_tran ATPase DUF815 AAA_3 AAA_17 NB-ARC AAA_24 Parvo_NS1 AAA_lid_PRS2_C AAA_30 TsaE AAA_11 Zeta_toxin PhoH SLFN-g3_helicase AAA_19 NACHT Vps4_C IPT Motif Other DBs NCBI-ProteinID:  QLG27680 UniProt:  A0A7D5KUM5 LinkDB All DBs Position 1766208..1768433 Genome browser AA seq 741 aa AA seqDB search MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN TDTVRIDGFTRQNADVGIGERVTIRKAEAQKAESLTLAPPEEASVQFGSDAAGMVKRQIL KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVDTEPDNVVLITEDTEVELREEPISGFE KTGGGITYEDIGGLQGEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLA KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDESPSIIFIDELDSIAPKRED VTGEVERRVVAQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDES GRKEVLQIHTRGMPLSDDVNLDRLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE DIPPSLIDRMIVKRSDFHGALADVEPSAMREVLVELPKITWDDVGGLEDPKQRVKEAVEW PLSDPEKFQRMGVEAPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES EKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDGLEEMGDV MVIGATNRPDMIDPALIRSGRFDRLVMIAQPDEEGREQILKIHTDDTPLAADVSLRELAE ITDGYVGSDLESIAREAAIEALREEDDAEEVGMRHFRQAMENVRPTISEDIMSYYEGIEE QFKGGGTDSLRRDKGGRIGFQ NT seq 2226 nt NT seq  +upstreamnt  +downstreamnt atgaacgaagttcaactcgaagtcgcgaaggcgtacccgaacgactcggggcgcggtatc gcgcgtctcgaccccgacaccctactccacctgaagctctcccccggcgacatcatcgag atcgagggcgccgagaccacggcggcgaaggtgtggcgcgccgaccggcaggactggaac accgacaccgtccgcatcgacgggttcacgcgccagaacgccgacgtcggtatcggtgag cgcgtcacgatccgcaaagcggaggcacagaaggccgagagcctcacgctcgcgccgccg gaggaggcgtccgtccagttcggctcggacgccgccggcatggtgaagcggcagatcctc aagcgtccggtcgtcgagcgcgacatcgtgccggtcatgtcgagcacgaaccacccgttc atgcgctcgccgggccaggcaatcccgctcatcgcggtcgacaccgaacccgacaacgtc gtcctcatcaccgaggacaccgaggtggagctccgcgaggagcccatctccgggttcgag aagaccggcggcggcatcacctacgaggacatcggcggcctccagggcgagatccagcgg gtccgggagatggtcgaactcccgatgaagcacccgcagatcttccagaagctcggcatc gagccgccacagggcgtgctcctccacggcccgccgggcaccgggaagacgctgctcgcg aaggccgtcgccaacgagaccagcgcctcgttcttctccatcgcggggcccgagatcatc tcgaagtactacggcgagtccgaacagcagctccgggagatcttcgaggacgcgaaggac gagtcgccctccatcatcttcatcgacgaactcgactccatcgcgcccaaacgcgaggac gtgaccggcgaggtcgagcgccgcgtcgtcgcccagctgctgacgatgatggacgggctc gagacccgcggccaggtcatcgtcatcgccgcgaccaaccgcgtcgactccgtcgacccg gcgctccgccgtcccggccgcttcgaccgcgagatcgagatcggcgtcccggacgagtcc ggccgcaaggaggtgctgcagatccacacccgggggatgccgctctcggacgacgtgaac ctcgaccgcctggccgacgagacccacggcttcgtcggcgccgacatcgagagcctgacg aaggaggccgcgatgaaggcgctccgccggtacctccccgagatcgacctcgacgaggag gacatcccgccgagcctcatcgaccgcatgatcgtcaagcggagcgacttccacggcgcg ctcgcggacgtcgagccgtcggcgatgcgggaggtgctcgtcgagcttccgaagatcacc tgggacgacgtcggcgggctcgaggaccccaagcagcgggtcaaggaggccgtcgagtgg ccgctgtccgacccggagaagttccagcgcatgggcgtcgaggcgccgaagggcgtcctc ctgtacggcccgcccggcacgggcaagacgctgatggcgaaggccgtcgccaacgagacg aacgcgaacttcatctccgtgcgcggcccgcagctgctctcgaagtgggtcggtgagtcc gagaaggccatccggcagacgttccggaaggcccgccaggtgtcgccgacgatcatcttc ttcgacgagctcgacagcctcgcgccgagccgcggacaggagatgggcaacaacgtctcc gagcgcgtcgtgaaccagctgctcaccgaactcgacgggctcgaggagatgggcgacgtg atggtcatcggcgcgacgaaccggccggacatgatcgacccggcgctgatccgttcgggc cggttcgaccggctcgtgatgatcgcacagccggacgaggaggggcgcgagcagatcctc aagatccacacggacgacacgcccctggccgccgacgtgagcctccgcgaactcgcggag atcacagacggctacgtcggctcggacctggagtccatcgcgcgcgaggccgccatcgag gcgcttcgcgaggaggacgacgccgaggaggtcggcatgcgccacttccgccaggcgatg gagaacgtccggccgacgatctccgaggacatcatgagctactacgagggcatcgaggag cagttcaagggcggcggcaccgactcgcttcgcagggacaagggcggtcggatcgggttc caatag

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