Halorarum halophilum: HUG10_10900
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Entry
HUG10_10900 CDS
T06682
Name
(GenBank) DNA-directed RNA polymerase, subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
halg
Halorarum halophilum
Pathway
halg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HUG10_10900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halg03021
]
HUG10_10900
03019 Messenger RNA biogenesis [BR:
halg03019
]
HUG10_10900
Transcription machinery [BR:
halg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
HUG10_10900
RNA polymerase I system
HUG10_10900
Messenger RNA biogenesis [BR:
halg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
HUG10_10900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Zn_Ribbon_1
DZR
Zn_ribbon_RanBP
Zn_ribbon_3
HypA
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
QLG28031
UniProt:
A0A7D5GI87
LinkDB
All DBs
Position
complement(2146938..2147135)
Genome browser
AA seq
65 aa
AA seq
DB search
MAEDRLACRECHYVNGPDSQTCDNCGSSSLTEDWAGYIIITHPEKSEIAPEMNVTQAGSY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaccggctcgcgtgccgcgagtgccactacgtgaacgggccggacagccag
acgtgcgacaactgcggctcctcctcgctgacggaggactgggccggctacatcatcatc
acccaccccgagaagtcggagatcgcccccgagatgaacgtgactcaggcgggcagctac
gcgctgaaggtccgctga
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integrated database retrieval system
