KEGG   Halorarum halophilum: HUG10_12360
Entry
HUG10_12360       CDS       T06682                                 
Symbol
endA
Name
(GenBank) tRNA-intron lyase
  KO
K01170  tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
Organism
halg  Halorarum halophilum
Brite
KEGG Orthology (KO) [BR:halg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:halg03016]
    HUG10_12360 (endA)
Enzymes [BR:halg01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     HUG10_12360 (endA)
Transfer RNA biogenesis [BR:halg03016]
 Prokaryotic type
  tRNA spricing factors
   tRNA splicing endonucleases
    HUG10_12360 (endA)
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-ProteinID: QLG28289
UniProt: A0A7D5GY49
LinkDB
Position
complement(2456552..2457583)
AA seq 343 aa
MEATLRDDVVVASGDARQRFHDSRGYGRARGAEVTLARIEAAHLLYRGDLESVDGSGFRE
FFTRSVAEGKRFAARFLVYADLRERGFYVTPDRDGWPGEGADPLPDLTVFARGEKPGGDV
AYRIRVAGEREELPARDLADLSLAVVDEESEVTYFDCAAGGGFEGDTEYDLPRSLDADLL
EDRVVCWDPPESLYESAFYGQPIAGRDAAVVAGLQLSLLEAADLAERGTVALDPDAVVER
GREVEGSRFDRRLTVYRRLRDRGVVPKTGYKFGADFRTYDAVESVADLPHSEALVRVVEP
DHRFHPRDLALDVRLAGGVRKRMVFALAGDDSVAYLTVARLTP
NT seq 1032 nt   +upstreamnt  +downstreamnt
atggaagccacgctccgcgacgacgtcgtggtcgcctcaggcgacgcccgccagcggttc
cacgactcgcgcggctacggccgggcccgcggcgccgaggtcacgctcgcccgcatcgag
gccgcccatctgctgtaccgcggcgacctcgagtccgtcgacgggagcgggttccgcgag
ttcttcacccggtcggtggcggaggggaagcggttcgccgcccggttcctggtgtacgcc
gacctgcgcgagcgcggcttctacgtcacacccgaccgcgacggctggccgggcgagggc
gccgacccgctcccggacctcaccgtcttcgcccgcggggagaagcccggcggcgacgtg
gcctaccggattcgcgtcgccggcgagcgcgaggagctcccggcccgcgacctggccgac
ctctcgctcgccgtcgtcgacgaggagagcgaggtgacgtacttcgactgcgcggcgggc
gggggcttcgagggcgacaccgagtacgacctcccccggtcgctcgacgccgacctgctg
gaggaccgcgtcgtctgctgggacccgcccgagtcgctgtacgagtcggcgttctacggc
cagccgatcgcggggcgggacgccgccgtggtggccggcctccagctctcgctgctcgag
gccgccgacctcgccgagcgcgggaccgtggccctcgatccggacgcggtcgtcgagcgc
ggccgggaggtcgaggggagcaggttcgatcgccggctgaccgtctaccgacgcctgcgc
gaccggggcgtcgtccccaagacgggctacaagttcggcgccgacttccgcacgtacgac
gcggtcgaatcggtggcggacctcccgcactccgaggcactggttcgggtcgtcgagccc
gaccaccggttccacccgcgggacctcgcgctagacgtgcgcctcgccggcggcgtgcgg
aagcgaatggtttttgcgctggccggcgacgattcggtcgcgtacctgacggtcgcacga
ctcaccccatga

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