Halorarum halophilum: HUG10_12360
Help
Entry
HUG10_12360 CDS
T06682
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
halg
Halorarum halophilum
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halg03016
]
HUG10_12360 (endA)
Enzymes [BR:
halg01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HUG10_12360 (endA)
Transfer RNA biogenesis [BR:
halg03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HUG10_12360 (endA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QLG28289
UniProt:
A0A7D5GY49
LinkDB
All DBs
Position
complement(2456552..2457583)
Genome browser
AA seq
343 aa
AA seq
DB search
MEATLRDDVVVASGDARQRFHDSRGYGRARGAEVTLARIEAAHLLYRGDLESVDGSGFRE
FFTRSVAEGKRFAARFLVYADLRERGFYVTPDRDGWPGEGADPLPDLTVFARGEKPGGDV
AYRIRVAGEREELPARDLADLSLAVVDEESEVTYFDCAAGGGFEGDTEYDLPRSLDADLL
EDRVVCWDPPESLYESAFYGQPIAGRDAAVVAGLQLSLLEAADLAERGTVALDPDAVVER
GREVEGSRFDRRLTVYRRLRDRGVVPKTGYKFGADFRTYDAVESVADLPHSEALVRVVEP
DHRFHPRDLALDVRLAGGVRKRMVFALAGDDSVAYLTVARLTP
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaagccacgctccgcgacgacgtcgtggtcgcctcaggcgacgcccgccagcggttc
cacgactcgcgcggctacggccgggcccgcggcgccgaggtcacgctcgcccgcatcgag
gccgcccatctgctgtaccgcggcgacctcgagtccgtcgacgggagcgggttccgcgag
ttcttcacccggtcggtggcggaggggaagcggttcgccgcccggttcctggtgtacgcc
gacctgcgcgagcgcggcttctacgtcacacccgaccgcgacggctggccgggcgagggc
gccgacccgctcccggacctcaccgtcttcgcccgcggggagaagcccggcggcgacgtg
gcctaccggattcgcgtcgccggcgagcgcgaggagctcccggcccgcgacctggccgac
ctctcgctcgccgtcgtcgacgaggagagcgaggtgacgtacttcgactgcgcggcgggc
gggggcttcgagggcgacaccgagtacgacctcccccggtcgctcgacgccgacctgctg
gaggaccgcgtcgtctgctgggacccgcccgagtcgctgtacgagtcggcgttctacggc
cagccgatcgcggggcgggacgccgccgtggtggccggcctccagctctcgctgctcgag
gccgccgacctcgccgagcgcgggaccgtggccctcgatccggacgcggtcgtcgagcgc
ggccgggaggtcgaggggagcaggttcgatcgccggctgaccgtctaccgacgcctgcgc
gaccggggcgtcgtccccaagacgggctacaagttcggcgccgacttccgcacgtacgac
gcggtcgaatcggtggcggacctcccgcactccgaggcactggttcgggtcgtcgagccc
gaccaccggttccacccgcgggacctcgcgctagacgtgcgcctcgccggcggcgtgcgg
aagcgaatggtttttgcgctggccggcgacgattcggtcgcgtacctgacggtcgcacga
ctcaccccatga
DBGET
integrated database retrieval system