Halorarum halophilum: HUG10_12430
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Entry
HUG10_12430 CDS
T06682
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
halg
Halorarum halophilum
Pathway
halg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG10_12430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halg03000
]
HUG10_12430
03021 Transcription machinery [BR:
halg03021
]
HUG10_12430
Transcription factors [BR:
halg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
HUG10_12430
Transcription machinery [BR:
halg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HUG10_12430
RNA polymerase III system
TFIIIB
HUG10_12430
RNA polymerase I system
SL1/TIF-1B
HUG10_12430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF218
Motif
Other DBs
NCBI-ProteinID:
QLG28301
UniProt:
A0A7D5K1X4
LinkDB
All DBs
Position
2472330..2472890
Genome browser
AA seq
186 aa
AA seq
DB search
MADAKESIHIENVVASTGIGQELDLQTVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFR
SGKIVCTGAKSTDAVHEALHLVFDELRALDIPIEDEPEITVQNIVTSADLGASLNLNAIA
IGLGLENIEYEPEQFPGLVYRLGEPDVVALLFGSGKLVITGGKEPVDAEEAVDVITERLS
DLGLLG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcaaaggagtcgatacacatcgagaacgtcgtcgcgtcgacgggaatcggg
caggaactcgacctccagacggtggcgatggacctcgaaggggcggactacgacccagaa
cagtttcccgggctggtgtaccggacgcagaacccgaagagcgccgcgctcatcttccgc
tcgggcaagatcgtctgtaccggggcgaaatcgaccgacgcggtccacgaggcgctccac
ctcgtgttcgacgagctgcgcgcgctcgacattcccatcgaggacgagccggagatcacc
gtccagaacatcgtcacctcggcggatctcggcgcctcgctcaacctcaacgcgatcgcc
atcggcctcggcctcgagaacatcgagtacgagccggagcagttccccgggctggtgtac
cgcctcggcgaacccgacgtcgtggcgctgctgttcggctcgggcaagctcgtgatcacc
ggcgggaaggagcctgtcgacgcggaggaggccgtagacgtcatcaccgaacggctctcg
gacctcggcctgctcggctga
DBGET
integrated database retrieval system
