Halorarum halophilum: HUG10_13335
Help
Entry
HUG10_13335 CDS
T06682
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
halg
Halorarum halophilum
Pathway
halg03022
Basal transcription factors
halg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG10_13335
09124 Replication and repair
03420 Nucleotide excision repair
HUG10_13335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halg03021
]
HUG10_13335
03036 Chromosome and associated proteins [BR:
halg03036
]
HUG10_13335
03400 DNA repair and recombination proteins [BR:
halg03400
]
HUG10_13335
Enzymes [BR:
halg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HUG10_13335
Transcription machinery [BR:
halg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HUG10_13335
Chromosome and associated proteins [BR:
halg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HUG10_13335
DNA repair and recombination proteins [BR:
halg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HUG10_13335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
SLFN-g3_helicase
ATPase
Zot
ResIII
AAA_16
AAA_25
GvpD_P-loop
DUF7539
AAA_5
AAA_34
nSTAND3
SecA_DEAD
HBB
Motif
Other DBs
NCBI-ProteinID:
QLG29507
UniProt:
A0A7D5GNS5
LinkDB
All DBs
Position
complement(2651473..2653593)
Genome browser
AA seq
706 aa
AA seq
DB search
MDRVGNALARGQDVLLEGAPGTGKTLSALVPALAHAREHDRTVVITTNVHQQMRQFVEDA
RAINETEPIRASVFKGKSSMCHIDVDYQECQTLRDTTRSLVEDQNDKQQLERRLDDLTDE
MRDGGSGGGGGGDGSAAEARQAVADELESLESNIEGATNVCEHYLNNLTADTDEFFSWLF
RDVRRPDEVYEYAERQGLCGYELLKEGMEDVELVVCNYHHLLDPQIREQFFRWLDREPED
VITVFDEAHNVESAARDHASEALTENTLESALSELEETDDSRAEPAENVLRAFTDALRAT
CEDGLGFGERERVGENWYDLSVANEDRRDDLTLAFLERYEGRGIRAECDLALQLGKRLDE
EYEDAYRDGETTSRRECQLLPAASFVSAWMDGGGELGQHPMVSVRRDAGTDEVYGRAELY
TCIPREVTAALFDEVYASVLMSATLRPFDVTQDVLGLNSPATLAYGLEYPEENRRTYSVS
TPALFASERDEPDTQETVASTLSDVIRFTPGNSLLFFPSYSEAERYHELLSGDPELGTLL
LDGSDPDTEELRKRLVESDDAALFTSLWGTLAEGVSFDGDAARTVAVVGVPYPHLSERME
AVQDAYDRAFAERSRDAGWEYAVEIPTVRKTRQALGRVIRSPDDFGVRLLLDKRYTNADM
GKYSVRGTFPPEEREELIDIRPDKLKFAMMNFYSDHDAYSGSPPEP
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaccgggtcggcaacgcgctcgcgcggggccaggacgtgctcctcgagggggcgccc
ggcaccgggaagacgctctccgcgctcgtgccggcgctcgcacacgcccgcgagcacgac
cgcacggtcgtcatcaccacgaacgtccaccagcagatgcggcagttcgtcgaggacgcc
cgcgccatcaacgagaccgaacccatccgcgcgtcggtgttcaaggggaagtcctcgatg
tgccacatcgacgtggactaccaggagtgccagacgctgcgggacacgacccggtcgctc
gtcgaggatcagaacgacaagcagcagctcgaacggcggctcgacgacctcaccgacgag
atgcgcgacggcggaagcggtggcggaggcggcggcgacggctcggccgcggaggcccga
caggcggtcgcggacgaactcgagtcgctggagtcgaacatcgagggggcgacgaacgtc
tgcgagcactacctcaacaacctcaccgccgacaccgacgagttcttctcgtggctgttc
cgggacgtgcgtcggcccgacgaggtgtacgagtacgccgagcgacagggtctgtgcggg
tacgagctcctgaaggaggggatggaggacgtcgaactcgtcgtctgcaactaccaccac
ctgctcgacccgcagatccgggagcagttcttccgctggctcgaccgcgagccggaggac
gtcatcacggtgttcgacgaggcccacaacgtcgagagcgccgcccgcgaccacgcgagc
gaggcgctcaccgagaacacgctcgaatcggcgctctcggaactggaggagaccgacgac
tcgcgggcagagccggccgagaacgtcctccgagcgttcacggacgcgctccgggcgacc
tgcgaggacgggctcggcttcggcgagcgcgagcgcgtcggcgagaactggtacgacctc
tcggtcgcgaacgaggaccgccgcgacgacctcacgctcgcgttcctcgagcgctacgag
gggcggggcatccgcgcggagtgcgacctcgcgctccagctcggcaagcgcctcgacgag
gagtacgaggacgcctaccgcgacggggagacgaccagccggcgggagtgtcagctcctc
cccgcggcgtcgttcgtctcggcgtggatggacggcggcggcgagctcggccagcacccg
atggtctcggtgcgccgggacgcgggcaccgacgaggtgtacggccgggccgagttgtac
acctgcatcccgcgggaggtgaccgcggcgctgttcgacgaggtgtacgcctcggtgctg
atgtccgcgacgctccgcccgttcgacgtgacccaggacgtgctggggctgaactcgccg
gcgacgctggcgtacggcctggagtacccggaggagaaccgccggacgtactccgtgtcg
acgccggcgctgttcgcctcggagcgcgacgaaccggacacgcaggagacggtcgcctcc
acgctctcggacgtgatccgcttcacgccgggcaacagcctcctcttcttcccgtcctac
tcggaggccgagcggtaccacgaactgctctccggggaccccgaactcgggacgctgctg
ctcgacggttcggacccggacaccgaggagctgcgtaagcgactcgtcgagagcgacgac
gccgcactgttcacctcgctgtgggggacgctggcggagggcgtgagcttcgacggcgac
gcggcccggaccgtcgcggtcgtcggcgtgccgtacccccacctctccgagcggatggag
gcggtgcaggacgcctacgaccgggccttcgcggagcgctcgcgggacgccggctgggag
tacgccgtcgagatcccgacggtgcggaagacccggcaggcgctcgggcgcgtcatccgc
tcgccggatgacttcggggttcgcctgctcctcgacaagcgctacacgaacgcggacatg
gggaagtactccgtgcgcgggacgttcccgccggaggagcgcgaggagctcatcgacatc
cggccggacaagctgaagttcgcgatgatgaacttctactccgatcacgacgcctattct
ggttcgccaccggagccgtag
DBGET
integrated database retrieval system
