Halorarum halophilum: HUG10_16950
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Entry
HUG10_16950 CDS
T06682
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
halg
Halorarum halophilum
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halg03000
]
HUG10_16950
Transcription factors [BR:
halg03000
]
Prokaryotic type
Helix-turn-helix
Other families
HUG10_16950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
MarR_2
HTH_29
Rrf2
HTH_Cmi2_C
YflT
HTH_47
E2F_TDP
DUF5696
Motif
Other DBs
NCBI-ProteinID:
QLG29114
UniProt:
A0A7D5K9H9
LinkDB
All DBs
Position
complement(3411497..3412567)
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AA seq
356 aa
AA seq
DB search
MATDPDASEEGGTDEVGENALRERLQLFGLSDKEVDAYLAVLAEGEATVRTVAEAAGVTQ
RYVYDIAEDLEARGLVRVHDHVTPTLLRAEPPAEAIPALTDRLGAVTPALEARYQQPGPA
TAEFETVKSRPTAIKRLRTLVEDATEEVFLSAPGNVVPEIRSALADAHDRGVFVLLLVSD
SGHRTDFDGVASVVREWDAEGPLNTAVDNEAAMVGDAGLFSGRHADEVAVVVRQGHLAGS
VLSASISSFWPAATEIHVTDPVELPRTFESFRHAIFQARLHRMAGVEVEAIVETQRHGEV
AGRVTAVRQGFLEPATNDFPVENGLVLETPDGTVSVGGVGAFIEDYRAVRVTLQET
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgacccggacgcgtccgaggagggagggacggacgaggtcggcgagaacgcc
ctgcgagagcgtcttcagctgttcggcctctccgacaaggaggtggacgcgtacctcgcc
gtgctcgcggaaggggaggcgaccgttcggaccgtcgcggaggccgcgggggtcacccag
cggtacgtgtacgacatcgcagaggatctcgaggcccgcgggctcgtgcgcgtccacgac
cacgtgactccgacgctcctgcgggcggagccgcccgcggaggccatcccggcgctcacc
gaccggctcggcgcggtcacgccggcgctcgaagcgcggtaccagcaacccggtccggcg
accgccgagttcgagaccgtgaagtcccggccgacggcgatcaagcggctccggacgctc
gtcgaggacgccaccgaggaggtgttcctctcggcgcccggcaacgtcgtgcccgagatc
aggagcgcgctcgcggacgcccacgaccgcggcgtgttcgtgctcctgctcgtcagcgac
agcggccaccgcacggacttcgacggggtcgcgtcggtggtccgcgagtgggacgcggag
gggccgctgaacacggccgtcgacaacgaggcggcgatggtcggcgacgccggcctgttt
tcgggacggcacgccgacgaggtggccgtcgtcgtccggcagggtcacctcgccggctcg
gtgttgagcgcctcgatcagctccttctggcccgccgcgacggagatccacgtgaccgac
cccgtcgaactgccccggacgttcgagtcgttccggcacgccatcttccaggcccgactc
caccggatggccggcgtcgaggtcgaagcgatcgtcgagacccagcggcacggcgaagtc
gccggccgcgtcacggcggtccgacaggggttcctcgaaccggcgacgaacgacttcccc
gtcgagaacggactcgtactcgagacgccggacggcaccgtcagcgtcggcggcgtcggt
gcgttcatcgaggactaccgcgcggtccgggtaaccctccaggagacgtga
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