Halorarum halophilum: HUG10_17085
Help
Entry
HUG10_17085 CDS
T06682
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halg
Halorarum halophilum
Pathway
halg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG10_17085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halg03021
]
HUG10_17085
Transcription machinery [BR:
halg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HUG10_17085
Prokaryotic type
Archaeal type
TFB
HUG10_17085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Sigma70_r4
Zn_ribbon_RPB9
Trm112p
Cyclin_C
Sigma70_r4_2
Zn_ribbon_FGT1_1
Cyclin_N
Zn_ribbon_LysW
DZR
Cas12f1-like_TNB
Zn_ribbon_3
Zn_ribbon_RRN7
A2L_zn_ribbon
Zn_ribbon_PaaD
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QLG29139
UniProt:
A0A7D5K9K0
LinkDB
All DBs
Position
complement(3440380..3441390)
Genome browser
AA seq
336 aa
AA seq
DB search
MSNARHFKRAETEHSENERERETEAAADEQERCPECGGHLEVDDAHGETVCRDCGLVVDE
DSVDRGPEWRAFDAAEKDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNQLSGSQRRRM
SRLRTWNERLRTTDHQDRNLKQALGEIERMASALGLPKNVRETASVIYRRALEKDMLPGR
SIEGIATASLHAAARMANVPRSIDEVARVSRVDEETFERAYRYLVRELSLEIEPADPAEY
VPRFASDLGVSDETERQARDLLETAKRSNVHSGKSPVGLAAAAIYAAGILTNEDLTQKEV
SEVTDMSEVTIRNRYQELLQARDDARGFGDGAGSTA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcacgacacttcaaacgggccgagacggagcacagcgagaacgaacgtgaa
cgagaaacggaagccgcggcggacgagcaggagcgctgtccggagtgcggcggccacctc
gaagtcgacgacgcgcacggcgagacagtgtgtcgcgactgcggcctcgtcgtcgacgag
gactccgtggaccgcgggccggagtggcgcgcgttcgacgccgccgagaaggacgaaaag
tcccgcgtcggcgcgccgacgacgaacatgatgcacgacaaggggctctcgaccaacatc
ggctggcaggacaaggacgcctacggcaaccagctgtcgggcagccagcgacggcgcatg
tcgcggctccgcacctggaacgagcggctccgcaccaccgaccaccaggaccggaacctg
aagcaggcgctcggcgagatcgagcggatggcctcggcactcggcctgccgaagaacgtc
cgcgagaccgcctcggtcatctaccgccgcgcgctggagaaggacatgctgccggggcgc
tccatcgagggcatcgccacggccagcctccacgccgccgcgcggatggcgaacgtcccg
cgctccatcgacgaggtggcacgggtctcccgcgtcgacgaggagacgttcgagcgcgcc
taccgctacctggtccgcgaactgagcctggagatcgagccggccgacccggccgagtac
gtccctcggttcgcctcggacctcggcgtgagcgacgagaccgagcgtcaggcccgcgac
ctgctggagaccgccaagcggtcgaacgtccactccggcaagtcgccggtcggcctcgcc
gcggccgccatctacgccgccggcatcctcacgaacgaggacctcacccagaaggaggtc
agcgaggtcaccgacatgagcgaggtcaccatccggaaccggtaccaggagctgctccag
gcccgcgacgacgcccgcggcttcggcgacggcgcggggtcgacggcctga
DBGET
integrated database retrieval system
