Halorarum halophilum: HUG10_17925
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Entry
HUG10_17925 CDS
T06682
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
halg
Halorarum halophilum
Pathway
halg03030
DNA replication
halg03420
Nucleotide excision repair
halg03430
Mismatch repair
halg03440
Homologous recombination
halg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUG10_17925
03420 Nucleotide excision repair
HUG10_17925
03430 Mismatch repair
HUG10_17925
03440 Homologous recombination
HUG10_17925
03460 Fanconi anemia pathway
HUG10_17925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halg03000
]
HUG10_17925
03032 DNA replication proteins [BR:
halg03032
]
HUG10_17925
03400 DNA repair and recombination proteins [BR:
halg03400
]
HUG10_17925
Transcription factors [BR:
halg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
HUG10_17925
DNA replication proteins [BR:
halg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
HUG10_17925
DNA repair and recombination proteins [BR:
halg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
HUG10_17925
MMR (mismatch excision repair)
HUG10_17925
DSBR (double strand breaks repair)
HR (homologous recombination)
HUG10_17925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
OB_Ssb-like
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QLG29293
UniProt:
A0A7D5H2Q1
LinkDB
All DBs
Position
complement(3593532..3594974)
Genome browser
AA seq
480 aa
AA seq
DB search
MGVIEDVYDDVETDVPFEEFEAAVEDKVEQMGGLADEETAAMLIAHELRDEEVNSVADIK
PGMDDVKFLAKVMKVGEVRTFERDGEDEDGHVLNVEVADESGRITISMWDGMAVDAAERL
SAGDVLRIMGRPKEGYNGLEVAVDKAEPDDDAEVDVEAIEEYRVEDLTLGASDVNLLGKV
LDTDSVRTFSRDDGSEGRVANLTLGDETGRIRVTLWDEQTERAEELEAGDTVEVVDGYVR
ERDGSLELHVGNRGAVEEVDADVEYVPETTDIAALELDETVDIAGGVIETNEKRTFDRDD
GSEGQVRNVRIKDGTGEIRVALWGEKADKDIDLADRVVFTDVEVQEGWQDDLEASAGWRS
TVSVLEGDGPTGSTGTGAGDGSDERDAGQGGLSSFGDEAAAVTADDDAGGSTDDQDRSDA
DDGGGVVEFTGTVVQAGDPIILDNGTETRSVETGAKLRLGEEVTVRGVEHDGSIDADDVF
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgatcgaggacgtctacgacgacgtggagaccgacgtcccgttcgaggagttc
gaggccgcggtcgaggacaaggtggagcagatgggcggactcgcggacgaggagacggcc
gccatgctcatcgcgcacgaactccgcgacgaggaggtgaactccgtcgccgacatcaag
ccggggatggacgacgtgaagttcctcgcgaaggtgatgaaggtcggcgaggtccggacc
ttcgagcgcgacggcgaggacgaggacgggcacgtgctcaacgtcgaggtggccgacgag
tccggccggatcaccatctcgatgtgggacgggatggccgtcgacgccgcggagcgactg
tccgcgggcgacgtgctccggatcatgggtcggccgaaggaggggtacaacggcctggag
gtcgccgtcgacaaggccgaaccggacgacgacgccgaggtcgacgtggaggcgatcgag
gagtaccgcgtcgaggacctgacgctcggggcctccgacgtcaacctcctcgggaaggtg
ctcgacactgactccgtccggaccttctcgcgcgacgacggctcggagggccgcgtcgcg
aacctcacgctcggcgacgagacggggcgcatccgggtcaccctctgggacgaacagacc
gagcgggcggaggagctggaggccggcgacacggtcgaggtcgtcgacggctacgtccgc
gagcgcgacggctcactcgaactccacgtcggcaatcgcggcgcggtcgaggaggtcgac
gccgacgtggagtacgtccccgagacgaccgacatcgcggcgctcgaactcgacgaaacg
gtcgacatcgcgggcggcgtcatcgagacgaacgagaagcggaccttcgaccgcgacgac
ggctcggagggccaggtccggaacgtccgcatcaaggacgggacgggcgagatccgcgtc
gcgctctggggtgagaaggccgacaaggacatcgacctcgcggaccgcgtcgtcttcacc
gacgtggaggtccaggagggctggcaggacgacctcgaagcctccgcgggctggcgctcc
accgtctcggtgctcgagggcgacgggccgaccggatcgaccggaacgggggccggcgac
ggttccgacgagcgcgacgccggacagggcggcctctcgtcgttcggcgacgaggcggct
gcggtaacggcggacgacgacgcgggcggctcgacggacgaccaggacaggtcagatgcg
gacgacggcggcggcgtcgtggagttcaccgggaccgtcgtgcaggccggcgatccgatc
atcctcgacaacgggacggagacccgaagcgtcgagaccggcgcgaagctccgcctcggc
gaggaagtgacggtccgaggcgtcgagcacgacggctccatcgacgccgacgacgtgttc
tga
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