Halorarum halophilum: HUG10_18790
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Entry
HUG10_18790 CDS
T06682
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
halg
Halorarum halophilum
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halg03000
]
HUG10_18790
Transcription factors [BR:
halg03000
]
Prokaryotic type
Helix-turn-helix
Other families
HUG10_18790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
HTH_10
PAS_3
GAF_2
PAS
GAF
GAF_3
PAS_9
Sigma70_r4
PAS_4
PAS_8
Sigma70_r4_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QLG29657
UniProt:
A0A7D5KGB1
LinkDB
All DBs
Position
unnamed1:complement(102535..104556)
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AA seq
673 aa
AA seq
DB search
MSDRDARQTLSSDEGGRPAGDRDSLLELLDEGVCRLDATGALVDFNDAFRSPIGYEREEL
LGESLSTVVAREDHSRLSAVLGWYDSPDAPDGVRFDAVQVRFEAEDGTRFQRELRLDAAR
PSAPGKTVAVVREPADDDDEAAATPDLSALLSELPALAYRCRDPEGAPTFVGDGCVDVTG
YDPGMLESGAVKWREDVVHPADRDRVREAVHTGLSLEDEFDVEYRILTADGRTTRVRELG
RTVRGPSGDPVAIDGLVVDVADRSRSDRALAAERDHLAALNSLNAIVRDITASAIGLSTR
EEIERLVPERLAASDAYESAWIGAVDVRRERVEVHAEAGVEGPLDDVELGAGGEADSEPT
GRAVRTGEVQVVRGDDADRGDAARREGVDEDRSRATAAVPIRHEGTVYGVVNVATARDRA
FGDEEREIVGHLGDLLGHAFAAIERKRALTNDEVVEVEFRLRDPFLTLGLPGGEGIIRFE
RAVPLGDGKFLEYGTASPGMVETLRAMPDGLEYVDEVAVDDAGDELVRFERRLSEPPLHC
LMAAEGNRIEESVIDSRDYRIVVQLSPGTDVRGVVETVHEVHPDVEFVSQRQVPEPSSTP
KRFRQSVLAELTQRQRSVVESAYYAGFFEWPREATGEEVAESLGVTAPTFHQHLRKAEAT
VFEKLLCEVALSE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccgagacgcgcgccagacactcagctcggacgagggggggcgaccggccggc
gaccgcgattcactcctggagctgctcgacgagggggtctgtcggctcgacgccacgggg
gcgctcgtcgacttcaacgacgcctttcgctcccccatcggatacgagcgcgaggaactg
ctcggcgagtccctctcgacggtcgtcgccagggaggaccactcgcggctctcggccgtg
ctcggctggtacgactcccccgacgcccccgacggcgtccgattcgacgccgtccaggtc
cggttcgaggccgaggacgggacgcggttccagcgcgaactccgcctcgacgccgcccgg
ccgtctgcccccgggaagaccgtcgcggtcgtccgcgaaccggccgacgacgacgacgag
gccgcagcgacccccgacctgtcggcgctcctctcggaactgccggcgctggcctaccgg
tgccgcgatccagagggcgcgcccacgttcgtcggcgacggctgcgtcgacgtcaccggc
tacgaccccgggatgctggagtccggcgcggtcaagtggcgggaggacgtcgtccacccg
gcggatcgggaccgcgtccgggaggcggtccacacggggttgtccctcgaggacgagttc
gacgtggagtaccgcatactgacggcggacgggcgcacgacccgggtcagggaactgggg
cggacggtccggggaccgtcgggcgacccggtcgccatcgacggcctcgtcgtcgacgtc
gccgaccgatccaggtccgaccgggcgctcgcggccgagcgcgaccatctcgccgcgctc
aacagcctcaatgcgatcgtccgcgacatcaccgcgtccgcgatcgggctgtcgacccgc
gaggagatcgagcgactcgtccccgagcgactggccgcctctgacgcctacgagtccgcc
tggatcggcgcggtggacgtccgacgcgaacgcgtggaggtgcacgccgaggcgggcgtc
gaggggcccctcgacgacgtcgaactgggtgcgggcggcgaggcggatagcgagccgacg
gggcgggcggtccgcaccggcgaggtgcaggtcgtccggggcgacgacgccgaccggggc
gacgcggcccggcgggagggggttgacgaggatcgctctcgcgccacggcggccgtcccg
atccgtcacgaggggaccgtctacggcgtggtgaacgtcgccacggcgcgcgaccgcgcc
ttcggcgacgaggagcgggagatcgtcggccacctcggcgacctgctcggacacgccttc
gccgccatcgagcggaagcgcgcgctgacgaacgacgaggtcgtcgaggtggagttcaga
ctccgcgacccgttcctcacgctcggcctgccgggtggcgaggggatcatccggttcgaa
cgggcggttccgctcggcgacgggaagttcctcgagtacgggacggcgtccccggggatg
gtcgagacgctccgggcgatgcccgacgggctcgagtacgtcgacgaggttgccgtcgac
gacgccggggacgagctggtgcggttcgagcggcgcctctcggagccgccgttgcactgt
ctcatggccgccgaggggaaccggatcgaggagtccgtcatcgacagcagggactaccgg
atcgtcgtccagctctcgcccgggaccgacgtccgcggggtggtcgagacggtccacgag
gtgcacccggacgtcgagttcgtctcgcagcggcaggtccccgagccgtcctccacgccc
aagcggttcaggcagtccgtcctcgcggaactcacccagcgccagcgttcggtcgtcgag
tccgcctactacgccggcttcttcgagtggccgcgcgaggcgacgggcgaggaggtcgcg
gagtcgctcggcgtcaccgcaccgacgttccaccagcacctccggaaggccgaggcgacc
gtgttcgagaagctcctgtgcgaggtggcactatccgagtag
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