Halodesulfurarchaeum formicicum HTSR1: HTSR_0166
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Entry
HTSR_0166 CDS
T04517
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halh03016
]
HTSR_0166 (rnz)
Enzymes [BR:
halh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HTSR_0166 (rnz)
Transfer RNA biogenesis [BR:
halh03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HTSR_0166 (rnz)
Prokaryotic type
HTSR_0166 (rnz)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
DUF7112
Motif
Other DBs
NCBI-ProteinID:
AOW79373
UniProt:
A0A1D8S213
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All DBs
Position
154412..155341
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AA seq
309 aa
AA seq
DB search
MSLRVTFLGTSGAIPTTDRNPSSIFLRRSGEAFLFDVGEGTQRQMMRFGTGFDVDAVFLT
HAHGDHVLGLPGLIQTWGFNGRSEPLVIYTPEGTRTSVVELIHAIGHEPDFPVSVEEVSP
GSTIRDREEYTIRTIAVDHDAPAVGYALVEADRKGRFDRERAEELGVPAGPLFSRLHEGE
SVELEDGTVVDPDQVVGPSRPGRTVVYTGDTRPTHTVETAAKDADLLIHDATFADDEAGR
ARETRHSTAREAARLARNARVKQLVLTHVSPRYAGNTGLLLREARDAFDGEVALAEDGRT
IEVPYPESA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagtctacgcgtcacctttctggggaccagcggggcgattccgacgaccgaccgcaac
cccagttcgatctttctgcgccggtccggcgaggccttcctcttcgacgtcggcgagggc
acccagcgccagatgatgcgctttgggaccggattcgacgtcgatgcggtctttctgacc
cacgctcacggcgatcacgtcctcgggctcccgggactcatccagacctgggggttcaac
ggccgcagcgaaccgctcgtgatctacacgcccgaggggacccggaccagcgtggtcgag
ttgatccacgcgatcggtcacgaaccggatttcccggtctcggtcgaagaggtctcgccg
ggatcgaccattagagaccgtgaggagtatacgatccgcaccatcgcggtcgatcacgac
gccccggcggtgggctatgccctggtcgaggccgatcgcaagggtcgctttgaccgcgag
cgagccgaagaactgggtgtcccggctggcccgctgttctccaggttgcacgagggcgag
tcggtcgaactcgaagatgggacagtcgtcgacccggaccaggtcgtcgggccgtccagg
ccgggccggacggtcgtgtacacgggggatacccggcccacccacacagtcgaaaccgcg
gcgaaagacgccgatctgctgatccacgacgccacgttcgccgacgacgaggccggtcgg
gcccgggaaactcgccactcgacggctcgcgaggcggcacggctggcacgaaacgcgagg
gtgaaacaactcgtgctcacccatgtctccccgcgatacgccggcaacactgggctcctg
ttgcgggaggccagggatgctttcgacggcgaggtcgccctggccgaggacggccggacg
atcgaggtgccctatccggagtcggcctag
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