Halodesulfurarchaeum formicicum HTSR1: HTSR_0312
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Entry
HTSR_0312 CDS
T04517
Name
(GenBank) cell division cycle protein CdcH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HTSR_0312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halh03019
]
HTSR_0312
03009 Ribosome biogenesis [BR:
halh03009
]
HTSR_0312
04131 Membrane trafficking [BR:
halh04131
]
HTSR_0312
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
halh04147
]
HTSR_0312
Messenger RNA biogenesis [BR:
halh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HTSR_0312
Ribosome biogenesis [BR:
halh03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HTSR_0312
Membrane trafficking [BR:
halh04131
]
SNARE
SNARE associated proteins
Others
HTSR_0312
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HTSR_0312
Exosome [BR:
halh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HTSR_0312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
AAA_16
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
nSTAND3
AAA_14
RNA_helicase
IstB_IS21
AAA_28
NPHP3_N
Mg_chelatase
AAA_7
AAA_3
DUF815
AAA_18
ATPase
ABC_tran
NB-ARC
Sigma54_activat
Parvo_NS1
AAA_30
AAA_24
AAA_17
TsaE
AAA_lid_PRS2_C
Vps4_C
NACHT
AAA_11
PhoH
SLFN-g3_helicase
IPT
Zot
DUF6406
Motif
Other DBs
NCBI-ProteinID:
AOW79513
UniProt:
A0A1D8S2F7
LinkDB
All DBs
Position
307834..310062
Genome browser
AA seq
742 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAEWTAAKVWRADRQDWN
SDTVRIDGFTRQNADVGIGERVTIRKASTEPADRLVLAPPEDASVQFGSDAAGMVKRQIL
KRPVVARDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGTVLITEDTEVELREEPIAGFE
RTGGGITYEDIGGLDKEIQRVREMVELPMKHPQVFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETAASFFSIAGPEIISKYYGESEQQLREIFEDAKEDAPSIVFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEV
GREEILRVHTRGMPLAEDVELSELADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEQ
EVPASLIDRMIVTERDFEGALNEVEPSAMREVLVELPKVTWDDVGGLESVKSQIKESVEW
PLSGAENFERLGVDPPAGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVVFFDELDSLAPGRGQDAGNNVSERVVNQLLTELDGLEQMEGV
MVVAATNRPDIIDPALIRSGRFDRLVMVGQPDEAGREEILRIHTADTPLSPDVSLREIAE
RTDGFVGSDLATVAREAAIEALRDDPDAEAVEMSHFRAALEDVRPTVTDDLLEYYDQVEE
ELTGGTGPAATGRDHERHVGFQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtccaactcgaggtggcaaaggcctacccgaacgactcgggccgcggtatc
gctcgtctcgatccggatacgctgttgcatctcaaactcagccccggcgacatcatcgag
atcgaaggggcggagtggacggccgcgaaggtctggcgggccgaccgccaggactggaac
agcgacaccgtccggatcgacgggttcaccagacagaacgccgacgtcggcatcggcgaa
cgggtcaccatccggaaggccagcaccgaaccggccgaccgactggtgctcgcgccgccg
gaggacgcaagcgtgcagttcggctcggacgcggccggaatggtcaaacgccagatcctc
aaacgccccgtcgtcgcccgcgacatcgtccccgtgatgtccagcaccaaccaccccttc
atgcgctcgccggggcaggcgatcccgctgatcgccgtcgagaccgagccggagggcacg
gtgctgatcaccgaggacaccgaagtcgaactccgcgaggaacccatcgccggcttcgag
cgcactggcggcggcatcacctacgaggacatcggcggcctggacaaggagatccagcgg
gtccgggagatggtcgagttgccgatgaaacacccacaggtgttcaagaagctcggcatc
gagccaccacagggcgtactcctccacggcccgcccgggacgggcaagaccctcctcgcg
aaggccgtggccaacgagaccgccgcgagtttcttctccatcgccggcccggagatcatc
tcgaagtactacggcgaatccgaacagcaactccgggagatcttcgaggacgccaaagag
gacgccccgtcgatcgtcttcatcgacgaactggactccatcgcgccgaaacgcgaggac
gtgaccggcgaggtcgagcgccgggtcgtcgcccagctgttgaccatgatggacggcctg
gagggtcgcggacaggtcatcgtgatcgcggcgaccaaccgggtcgatgccgtcgatccg
gcgctgcgtcgtccgggccgattcgaccgcgagatcgagatcggcgttccggacgaggtc
ggccgcgaggagatcctgcgggttcacacccgcgggatgcccctggccgaggacgtcgag
ctctccgaactcgcggatgacacccacggcttcgtgggcgcggacatcgagtccctctcc
aaggaggctgcgatgcgggcgctccgtcgctatctccccgagatcgacctggacgaacag
gaggtgccagcctcgctgatcgaccggatgatcgtcaccgaacgggacttcgaaggggcg
ctcaacgaggtcgagccctcggcgatgcgggaggtgctggtcgaactcccgaaggtcacc
tgggacgacgtcggtggcctcgaatcggtcaaatcccagatcaaagagagcgtcgagtgg
cccctctccggtgcggagaacttcgagcgcctgggcgtggacccgcctgcgggcgtgttg
ctctacgggccgcccgggacgggcaagaccctgatggccaaggcggtggcaaacgagacc
gacgccaacttcatcagcgtgcgcgggccacagctcctctcgaagtgggtcggcgaatcc
gagaaggccatccgccagaccttccggaaggccagacaggtcagccccacggtggtcttc
ttcgacgaactcgacagcctggcccccggccggggccaggacgcgggcaacaacgtgtcc
gagcgggtggtcaatcagttgctgactgaactcgatggcctcgaacagatggagggggtc
atggtcgtcgccgcgacgaaccgtcccgatatcatcgaccccgcgctgattcgctcgggc
cggttcgaccgcctggtgatggtcggccagcccgacgaggctggtcgcgaggagatcctg
cggatccacacggcggacacgccgctctcgccggacgtgagtctgcgggagatcgccgaa
cggaccgacggcttcgtgggttcggacctggcgacagtcgcccgggaagccgccatcgag
gcgctgcgggacgaccccgacgccgaggccgtggagatgtcacacttccgggcggccctg
gaggacgtgcggccgacggtgaccgatgacctgctcgagtactacgaccaggtcgaagaa
gaactgacaggagggacgggccccgccgctacgggtcgggaccacgaacgccacgtcggc
ttccagtaa
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