KEGG   Halodesulfurarchaeum formicicum HTSR1: HTSR_0566
Entry
HTSR_0566         CDS       T04517                                 
Name
(GenBank) ATPase AAA
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
halh  Halodesulfurarchaeum formicicum HTSR1
Pathway
halh04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:halh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    HTSR_0566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:halh03019]
    HTSR_0566
   03009 Ribosome biogenesis [BR:halh03009]
    HTSR_0566
   04131 Membrane trafficking [BR:halh04131]
    HTSR_0566
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:halh04147]
    HTSR_0566
Messenger RNA biogenesis [BR:halh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     HTSR_0566
Ribosome biogenesis [BR:halh03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    HTSR_0566
Membrane trafficking [BR:halh04131]
 SNARE
  SNARE associated proteins
   Others
    HTSR_0566
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    HTSR_0566
Exosome [BR:halh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HTSR_0566
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N CDC48_2 RuvB_N AAA_16 AAA_2 AAA_14 AAA_5 AAA_22 TIP49 NPHP3_N nSTAND3 AAA_33 RNA_helicase AAA_28 IstB_IS21 AAA_18 AAA_7 Mg_chelatase ABC_tran AAA_17 AAA_3 DUF815 NACHT AAA_lid_PRS2_C TsaE SLFN-g3_helicase AAA_24 AAA_25 Parvo_NS1 Sigma54_activat AAA_11 Zeta_toxin NB-ARC AAA_30 AAA_19 PhoH KAP_NTPase NTPase_1 bpMoxR Zot Histidinol_dh
Other DBs
NCBI-ProteinID: AOW79761
UniProt: A0A1D8S347
LinkDB
Position
complement(538587..540875)
AA seq 762 aa
MSDTLKLVVKPLKQKDAGRGLAAIDRRAMEELDLENGDYILIEGPNQGRAVARVWPGYPE
DEGKNIVRIDGRLRQEANVGIDDRVEIEKADIKPATSVTIALPQNLRIRGNVEPMLREKL
SGRPVTTGQTVPVSLGFGGIASVSGQQIPLKIADTDPEGTVVVTDSTEIHVSERPAEEIT
TETETVDTQTPNITYEDIGGLDDELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPG
TGKTLIAKAVASEIDAHFQTISGPEIMSKYYGESEEQLREVFEEAEEKAPAVIFIDELDS
IAPKRDETAGDVERRVVAQLLSLMDGLEERGDVVVIAASNRVDAIDPALRRGGRFDREIE
IGVPDRDGRTEILQVHTRGMPLADSVDIDEYAENTHGYVGADIEQLAKEAAMNALRRIRP
QIDLEADEIDAEILEELTVTDRDFSEAMKGITPSGLREVFIEVPDVTWEQVGGLEETKER
LRETVQWPLEFPEVFEQMDLDSPRGILLYGPPGTGKTLLAKAVASEAKNNFISVKGPELL
NKYVGESEKGIREIFQKARQNAPTVIFFDEIDAIAGQRGRQMGDSGVGERVVSQLLSELD
GIESLEDVVVIATTNRPDLIDDALLRPGRLDRHIHVPIPDEAARRAIFEVHTEHKPLADS
VDLDELARRTENYVGADIEAVCREATMQATREFLNSVDPEEATQGAANVRVTAEHFEHAL
EEVSPSIDDEIKRRYEELEERFTKARAESEAGVDDQFGRSFQ
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgagcgacacgctcaaactggttgtcaagcccctcaagcagaaggacgcggggcgggga
ctggcagccatcgaccgacgagcgatggaggaattggacctggagaacggcgattacatc
ctcatcgaggggccgaaccaggggcgggccgtcgctcgggtctggcccggctatcccgag
gacgagggcaagaacatcgtccggatcgacgggcgcctccggcaggaggcaaacgtcggc
atcgacgaccgcgtggagatcgagaaggccgacatcaagccggccacatccgtgacgatc
gccctgccacagaacctccggattcggggcaacgtcgagccgatgctccgggagaaactc
tccggccggcccgtcaccaccggacagacggtgccggtctcgcttggcttcggtgggatc
gcctccgtctcgggccagcagatccccctcaagatcgcggacaccgaccccgaagggact
gtcgtcgtcaccgactcgacggagatccacgtgagcgagcgccccgcagaggagatcacc
accgagaccgagacggtcgatacccagacccccaacattacctacgaggacatcggcggc
ctggacgacgaactcgaacaggtccgggagatgatcgagttgccgatgcgccaccccgag
ctcttccagcagctcggcatcgaaccgccaaaaggggtgctcctccacgggccgcccggc
acgggcaagaccctgatcgcgaaggccgtcgccagcgagatcgacgcgcacttccagacg
atctccggcccggagatcatgtccaaatactacggggagtcagaagaacagctccgggag
gtcttcgaggaggccgaggagaaggcccccgcagtcatcttcatcgacgaactggactcc
atcgcgccgaaacgcgacgagacagccggcgacgtcgagcgacgggtcgttgcgcaactg
ctctccctgatggacgggctcgaagagcgtggcgacgtggtcgtgatcgccgcctcgaac
cgtgtcgacgcgatcgatcccgcgctccggcgtggcggtcggttcgaccgcgagatcgag
atcggcgtcccggaccgggacggtcggaccgagatcctccaggtccacacccgcggaatg
ccactggccgacagcgtggacatcgacgagtacgcggagaacacccacggctacgtgggc
gcggacatcgagcaactggccaaagaggccgcgatgaacgccctgcggcggatccgtccc
cagatcgacctggaggccgacgagatcgacgccgagatcctggaggaactcacggtaacg
gaccgtgacttctcggaggcgatgaagggcatcacgccctccgggcttcgggaggtcttc
atcgaggtccccgacgtgacctgggaacaggtcggtggcctcgaagagaccaaagagcgg
ctgcgcgagaccgttcagtggcccctggagttccccgaggtcttcgagcagatggacctc
gattcgccgcgtggaatcctcctgtatggcccacccggaacggggaagaccctcctcgcg
aaagccgtcgccagcgaggccaagaacaacttcatctcggtgaaaggccccgaactcctg
aacaagtacgtgggcgaatccgagaaggggatccgggagatcttccagaaggccagacag
aacgccccgactgtgatcttcttcgacgagatcgacgccatcgcgggccagcgcggccgg
cagatgggcgattcgggcgtgggcgaacgcgtggtctcccagctgctgagcgaactcgac
ggcatcgaatccctcgaggacgtggtcgtgatcgcgacgacgaaccgtccggacctgatc
gacgacgccctgctccgtccgggccggctggaccggcacatccacgtgccgattccggac
gaggcagcccggcgggccatcttcgaggtccacacggagcacaaacccctggccgacagc
gtcgatctggacgagttggctcgtcgcaccgagaactacgtcggtgcggacatcgaggcg
gtctgccgcgaggcgaccatgcaggccacccgggagttcctcaacagcgtcgatcccgaa
gaggccacccagggcgcggccaacgttcgtgtgaccgccgagcacttcgagcacgcactc
gaagaagtgtcaccctcgatcgacgacgagatcaagcgtcgctacgaggaactcgaagaa
cggttcacgaaggcccgggccgaatccgaagccggcgtcgacgaccagttcggccggagc
ttccagtaa

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