Halodesulfurarchaeum formicicum HTSR1: HTSR_0566
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Entry
HTSR_0566 CDS
T04517
Name
(GenBank) ATPase AAA
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HTSR_0566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halh03019
]
HTSR_0566
03009 Ribosome biogenesis [BR:
halh03009
]
HTSR_0566
04131 Membrane trafficking [BR:
halh04131
]
HTSR_0566
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
halh04147
]
HTSR_0566
Messenger RNA biogenesis [BR:
halh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HTSR_0566
Ribosome biogenesis [BR:
halh03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HTSR_0566
Membrane trafficking [BR:
halh04131
]
SNARE
SNARE associated proteins
Others
HTSR_0566
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HTSR_0566
Exosome [BR:
halh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HTSR_0566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_14
AAA_5
AAA_22
TIP49
NPHP3_N
nSTAND3
AAA_33
RNA_helicase
AAA_28
IstB_IS21
AAA_18
AAA_7
Mg_chelatase
ABC_tran
AAA_17
AAA_3
DUF815
NACHT
AAA_lid_PRS2_C
TsaE
SLFN-g3_helicase
AAA_24
AAA_25
Parvo_NS1
Sigma54_activat
AAA_11
Zeta_toxin
NB-ARC
AAA_30
AAA_19
PhoH
KAP_NTPase
NTPase_1
bpMoxR
Zot
Histidinol_dh
Motif
Other DBs
NCBI-ProteinID:
AOW79761
UniProt:
A0A1D8S347
LinkDB
All DBs
Position
complement(538587..540875)
Genome browser
AA seq
762 aa
AA seq
DB search
MSDTLKLVVKPLKQKDAGRGLAAIDRRAMEELDLENGDYILIEGPNQGRAVARVWPGYPE
DEGKNIVRIDGRLRQEANVGIDDRVEIEKADIKPATSVTIALPQNLRIRGNVEPMLREKL
SGRPVTTGQTVPVSLGFGGIASVSGQQIPLKIADTDPEGTVVVTDSTEIHVSERPAEEIT
TETETVDTQTPNITYEDIGGLDDELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPG
TGKTLIAKAVASEIDAHFQTISGPEIMSKYYGESEEQLREVFEEAEEKAPAVIFIDELDS
IAPKRDETAGDVERRVVAQLLSLMDGLEERGDVVVIAASNRVDAIDPALRRGGRFDREIE
IGVPDRDGRTEILQVHTRGMPLADSVDIDEYAENTHGYVGADIEQLAKEAAMNALRRIRP
QIDLEADEIDAEILEELTVTDRDFSEAMKGITPSGLREVFIEVPDVTWEQVGGLEETKER
LRETVQWPLEFPEVFEQMDLDSPRGILLYGPPGTGKTLLAKAVASEAKNNFISVKGPELL
NKYVGESEKGIREIFQKARQNAPTVIFFDEIDAIAGQRGRQMGDSGVGERVVSQLLSELD
GIESLEDVVVIATTNRPDLIDDALLRPGRLDRHIHVPIPDEAARRAIFEVHTEHKPLADS
VDLDELARRTENYVGADIEAVCREATMQATREFLNSVDPEEATQGAANVRVTAEHFEHAL
EEVSPSIDDEIKRRYEELEERFTKARAESEAGVDDQFGRSFQ
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacgctcaaactggttgtcaagcccctcaagcagaaggacgcggggcgggga
ctggcagccatcgaccgacgagcgatggaggaattggacctggagaacggcgattacatc
ctcatcgaggggccgaaccaggggcgggccgtcgctcgggtctggcccggctatcccgag
gacgagggcaagaacatcgtccggatcgacgggcgcctccggcaggaggcaaacgtcggc
atcgacgaccgcgtggagatcgagaaggccgacatcaagccggccacatccgtgacgatc
gccctgccacagaacctccggattcggggcaacgtcgagccgatgctccgggagaaactc
tccggccggcccgtcaccaccggacagacggtgccggtctcgcttggcttcggtgggatc
gcctccgtctcgggccagcagatccccctcaagatcgcggacaccgaccccgaagggact
gtcgtcgtcaccgactcgacggagatccacgtgagcgagcgccccgcagaggagatcacc
accgagaccgagacggtcgatacccagacccccaacattacctacgaggacatcggcggc
ctggacgacgaactcgaacaggtccgggagatgatcgagttgccgatgcgccaccccgag
ctcttccagcagctcggcatcgaaccgccaaaaggggtgctcctccacgggccgcccggc
acgggcaagaccctgatcgcgaaggccgtcgccagcgagatcgacgcgcacttccagacg
atctccggcccggagatcatgtccaaatactacggggagtcagaagaacagctccgggag
gtcttcgaggaggccgaggagaaggcccccgcagtcatcttcatcgacgaactggactcc
atcgcgccgaaacgcgacgagacagccggcgacgtcgagcgacgggtcgttgcgcaactg
ctctccctgatggacgggctcgaagagcgtggcgacgtggtcgtgatcgccgcctcgaac
cgtgtcgacgcgatcgatcccgcgctccggcgtggcggtcggttcgaccgcgagatcgag
atcggcgtcccggaccgggacggtcggaccgagatcctccaggtccacacccgcggaatg
ccactggccgacagcgtggacatcgacgagtacgcggagaacacccacggctacgtgggc
gcggacatcgagcaactggccaaagaggccgcgatgaacgccctgcggcggatccgtccc
cagatcgacctggaggccgacgagatcgacgccgagatcctggaggaactcacggtaacg
gaccgtgacttctcggaggcgatgaagggcatcacgccctccgggcttcgggaggtcttc
atcgaggtccccgacgtgacctgggaacaggtcggtggcctcgaagagaccaaagagcgg
ctgcgcgagaccgttcagtggcccctggagttccccgaggtcttcgagcagatggacctc
gattcgccgcgtggaatcctcctgtatggcccacccggaacggggaagaccctcctcgcg
aaagccgtcgccagcgaggccaagaacaacttcatctcggtgaaaggccccgaactcctg
aacaagtacgtgggcgaatccgagaaggggatccgggagatcttccagaaggccagacag
aacgccccgactgtgatcttcttcgacgagatcgacgccatcgcgggccagcgcggccgg
cagatgggcgattcgggcgtgggcgaacgcgtggtctcccagctgctgagcgaactcgac
ggcatcgaatccctcgaggacgtggtcgtgatcgcgacgacgaaccgtccggacctgatc
gacgacgccctgctccgtccgggccggctggaccggcacatccacgtgccgattccggac
gaggcagcccggcgggccatcttcgaggtccacacggagcacaaacccctggccgacagc
gtcgatctggacgagttggctcgtcgcaccgagaactacgtcggtgcggacatcgaggcg
gtctgccgcgaggcgaccatgcaggccacccgggagttcctcaacagcgtcgatcccgaa
gaggccacccagggcgcggccaacgttcgtgtgaccgccgagcacttcgagcacgcactc
gaagaagtgtcaccctcgatcgacgacgagatcaagcgtcgctacgaggaactcgaagaa
cggttcacgaaggcccgggccgaatccgaagccggcgtcgacgaccagttcggccggagc
ttccagtaa
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