Halodesulfurarchaeum formicicum HTSR1: HTSR_0774
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Entry
HTSR_0774 CDS
T04517
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HTSR_0774 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halh03021
]
HTSR_0774 (rpoD)
Enzymes [BR:
halh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HTSR_0774 (rpoD)
Transcription machinery [BR:
halh03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HTSR_0774 (rpoD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Thioredoxin_14
RPN6_C_helix
Motif
Other DBs
NCBI-ProteinID:
AOW79963
UniProt:
A0A1D8S3M6
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All DBs
Position
complement(722179..722925)
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AA seq
248 aa
AA seq
DB search
MADTFEVEFIESGDREARFLVRGITPDLANGIRRAMLADVPTLSIDTVRFVENSSVMFDE
QLALRLGLVPLTTPEGEFEAGDVVTLALDVEGPGTAYSGDLVSKDPMVEPAEDGIPIIEL
KEDQRLEIEADAVLGSGRDHAKHQGGIAVGYRHLQEVEVLGEADEYGADETQIVRGVIEE
DGELITTEEFDNDLRNRYPEQEVAVRDVPNAFVFHVETDGSMPVTELVSRAVDSLYDRAD
ELETAVSL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaccttcgaggtcgagttcatcgaatccggcgaccgggaagccaggttcctc
gtcagggggatcaccccggacctggcaaacggcatccgccgcgcgatgctggccgacgtg
ccgaccctctcgatcgatacggttcggttcgtcgagaactccagtgtgatgttcgacgaa
cagctcgcacttcggctgggcctggtcccgttgaccacccccgagggcgagttcgaggcg
ggcgatgtcgtcacgctggccctcgacgtcgagggtcccggaacggcgtactcgggcgat
ctggtctccaaggatccgatggtcgaacccgccgaagacgggattccgatcatcgaactc
aaggaggaccagcgactcgagatcgaagccgatgccgtcctgggcagcggccgtgatcac
gccaaacaccagggtggcatcgccgtgggctatcgccacctccaggaagtcgaggttctc
ggcgaggccgacgagtacggcgcggacgagacacagatcgtccgcggcgtcatcgaggaa
gacggcgagttgatcacgaccgaggagttcgacaacgaccttcggaaccggtatccagag
caggaggtcgcggttcgtgacgtgccgaacgccttcgtgttccacgtcgagaccgacggc
tcgatgccggtcacggaactcgtgtcccgggctgtcgactcgctgtatgaccgagccgac
gaactcgaaacagccgtctcactgtag
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