Halodesulfurarchaeum formicicum HTSR1: HTSR_0817
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Entry
HTSR_0817 CDS
T04517
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halh03032
]
HTSR_0817 (gyrB)
03400 DNA repair and recombination proteins [BR:
halh03400
]
HTSR_0817 (gyrB)
Enzymes [BR:
halh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HTSR_0817 (gyrB)
DNA replication proteins [BR:
halh03032
]
Prokaryotic type
DNA Topoisomerases
HTSR_0817 (gyrB)
DNA repair and recombination proteins [BR:
halh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HTSR_0817 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Intein_splicing
LAGLIDADG_3
Toprim
HTH_3
HTH_31
HTH_19
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AOW80003
UniProt:
A0A1D8S3T3
LinkDB
All DBs
Position
complement(760067..763693)
Genome browser
AA seq
1208 aa
AA seq
DB search
MVAESNYGAGQIQVLEGLEAVRKRPAMYIGSTDGRGLHHLVYEVVDNAIDEALAGYCSHI
EVELHDDGSVSVRDDGRGIPVDTHEEYDRPAVEVILTVLHAGGKFDKESYQVSGGLHGVG
VSVVNALSEWLTVEVDRNGKRYEQRFERGEPATELETVSEVPEDQTGTRIQFKPDTDIFE
VENFSFSTLESRLRELAFLNSGVRISLIDDRDPDAETATFEYEGGIREFVEYLNETRTPL
HGDVIYLEDESAGVQVEIAMQATEDLQSSTHAFANNINTREGGTHLTGFKTALTRVVNGY
AKDHDLLKAIDGENLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSDVRGIVESALHD
GLNTYFEEHPDTAEAIISKAIEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDP
EDSELFIVEGDSAGGSTKQARDRKFQAVLPIRGKILNVEKHRLDRILENEEIRAMIRAIG
TGIGEEFDIDDLRYGRVILASVDGKDHGFIRDESGQTRFVEIGEYIDEVIEEDGNGYENH
EVLCFGLDDQETKFQPIDQVIRHEVDEPLYEIETSYGRNLRATASHSVFVHREGQVELAA
GEDIEAGDQVVAPRSVPLHGDREGERIDVLAELVQKSDEFDEEIFARGPGIEELFKKIVR
AEYTDGGADSVDRVQARVEAPEDVRTTLKEQRLEAGLTQQEVCNEVGIAQPITISQWERG
QSRPTVSNFQAYCDAVGVSAGAVMQNVSTTDSLLDQRWNNQYSGTQTNRVRDYVRVSELD
ESDLELIPDEAEVELTPQHHADQAIDRYITVDETLLDLFGFYAAEGSKSRRNGVRLAMGA
NNEPLIEKYQQAFEHVFGIRGKLSEYESRIDEVKLVNRVAAVVWEQVFGITGESATEKSV
PDIVFDVSKQGQQAFLRGYLLGDGTVTADKVSWTTTSRDLASAIMYLLSAQGVVGSHSKR
TPDKIPNTDEWGIESKSERHTVTVSAKSDLEKLREVWKVHPNSAKLAEYLADGVTNEKNR
RFEEVSDDLIALPVKGVKRVDPSSNYVYDFSVEADENFIAGMGGICAHNTDADVDGAHIR
TLLLTFFYRHMRPLLENGHVYAIKPPLYRIRYRGKTYDAMTEADRERIVEEECNGNPTQI
QRFKGLGEMNPEQLWESAMNPENRILKRITIEDAAEADRMFSVLMGDAVGPRKQFIKEHA
TDAEWVDI
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggaatcaaactacggagccgggcagatccaggtcctcgaggggctcgaggcc
gtccgcaagcgacccgcgatgtacatcgggtcgaccgacggccgtgggctccaccatctc
gtctacgaggtcgtggacaacgccatcgacgaggcgctggccggatactgttcgcacatc
gaagtcgagttacacgacgacggttccgtcagcgtgcgggacgacggccggggaatccca
gtcgatacccacgaggagtacgaccgccccgcggtggaggtcattctgacggtcctgcac
gccggcggcaagttcgacaaggagtcctatcaggtctcgggcgggctccacggcgtcggt
gtgtcggtcgtcaacgccctctcggagtggctcaccgtcgaagtcgaccggaacggaaag
cgatacgagcagcgcttcgagcggggtgagccggccacggagctggagacggtcagtgag
gtccccgaggaccagaccgggacccggatccagttcaaacccgacacggacatcttcgag
gtcgagaactttagtttctccacgctcgaatcccggcttcgggaacttgccttcctgaac
tccggcgtgcggatctccctgatcgacgaccgggatcccgacgccgagaccgcgaccttc
gagtacgagggcggcatcagggagttcgtcgagtacctcaacgagacgaggacgccgctc
cacggggacgtgatctatctagaggacgagtccgcgggcgtccaggtcgagatcgcgatg
caggccaccgaggatctccagtcctcgacacatgcctttgccaacaacatcaacacccgc
gaaggcggcacccacctcacgggcttcaagacggcactcaccagggtcgtgaacggctac
gcgaaagaccacgacctcctgaaagcgatcgacggggagaacctcaagggcgaggacatc
cgcgaggggctgaccgccgtcatctcggtgaaacaccccgacccacagttcgagggccag
accaagaccaaactgggcaacagcgacgtacggggcatcgtcgagtcggccctccatgac
gggctcaacacctacttcgaggaacacccggacacggccgaggcgatcatctcgaaggcc
atcgaagcggcgaaagcccggaaagccgcccagaaggccgaggagctgacccggcggaag
agcgccctggagagtacctcactccctggcaaactcgccgactgccagaccaaagatccc
gaggactcggagctgttcatcgtggaaggagacagcgctggcggctcgacaaagcaggcc
cgagatcggaagttccaggccgtgctgccgattcgcggcaagatcctcaacgtcgagaaa
caccgcctcgatcggatcctcgaaaacgaggagatccgggcgatgatccgggcgatcggg
accggcatcggcgaggagttcgacatcgatgatctccggtacggccgcgtgatcttggcg
agcgtcgatggaaaggaccacggcttcattcgggatgaaagtggtcaaacgaggtttgta
gaaattggggagtacatcgacgaagtcattgaagaggacggcaacggatatgagaatcac
gaagttctctgtttcggcctcgacgatcaggaaacgaagttccagccgatcgatcaggtc
attcgacacgaagtcgatgagccgttgtacgaaatcgaaacgagctatgggcgaaacctc
agagccactgcctcccatagcgtgtttgtccatcgtgaaggacaggtcgaactggctgcg
ggggaagacattgaggcgggcgatcaggtcgtcgcacctcgatccgttcccctgcatgga
gaccgtgagggagagcgtatcgacgtgcttgcagaactcgttcagaaatccgacgaattt
gacgaagagatatttgcacgcgggccaggcattgaggaactgttcaagaagatagttcgg
gccgaatacaccgatggtggggccgactcggtcgatcgagtccaggcgagagtcgaagcg
ccggaggacgttcgaacaacactgaaagagcaacgtctcgaagccgggctcacccagcaa
gaagtttgtaacgaggttggaattgcccaaccgattacgatctcccagtgggaacgaggg
caatcacgtccaacggtttcgaacttccaggcgtactgtgatgccgttggagtttctgcc
ggtgctgtaatgcagaacgtctcgacgactgattcgcttctcgatcagcgatggaataat
cagtattctggtacccagaccaatcgagtcagagattacgtccgtgtgagcgaattggac
gaatcggacctcgaactcattccggacgaagcggaggtggaattgacaccccagcaccat
gccgatcaggcaatagaccgatacattaccgtcgacgaaacgttactcgatctgttcggg
ttctacgcagctgaagggtccaaatcgcgcagaaatggggtccggttggcgatgggggcc
aacaacgaaccactgatcgagaagtatcagcaagcgttcgagcatgtgttcgggattcgg
gggaagttaagcgaatacgaaagcaggattgacgaagtaaaattggtcaatagagttgca
gcggtggtctgggaacaggtattcgggattactggtgaaagtgcaactgaaaagtccgtc
cccgacatcgtattcgacgtttctaagcagggacaacaggccttccttcgagggtatttg
ctcggtgatggaacggttacagcggataaagtcagctggacgacgacctctcgagatctg
gcgagtgcgatcatgtatctcctctccgctcaaggggtcgtcggctctcactcgaagaga
acaccggataaaatccccaacaccgacgaatgggggatcgaatcaaagtccgaacgccat
acggtcacagtcagtgcgaaatcggatctcgaaaaactccgagaggtatggaaggtccat
ccaaattcggcgaaattggcagaatatctcgccgatggcgtaacgaacgagaagaataga
cggttcgaagaagtctcggatgatctgattgcgcttccggtgaaaggtgtcaaaagagtc
gatccctcgagcaactacgtctatgatttctccgtcgaagccgacgagaacttcatcgcc
ggaatgggcggcatttgcgcccataataccgacgccgacgtggacggcgcccacatcaga
acgctgctgctgacctttttctaccggcacatgcgcccgctgctggagaacggccacgtg
tatgccatcaaaccgccgctctatcggatccggtatcgcgggaagacctacgacgccatg
accgaagccgaccgtgagcggatcgtcgaggaggagtgcaacggcaatccgacccagatc
cagcggttcaaggggctgggcgagatgaaccccgaacagctctgggagtcggcgatgaac
ccggagaaccgcattctcaagcggatcaccatcgaggacgccgccgaggccgaccggatg
ttctcggtgctgatgggcgatgcggtgggcccgcgaaaacagttcatcaaggaacacgcc
acggacgccgaatgggttgatatctga
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