Halodesulfurarchaeum formicicum HTSR1: HTSR_0983
Help
Entry
HTSR_0983 CDS
T04517
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halh03400
]
HTSR_0983 (smc)
DNA repair and recombination proteins [BR:
halh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HTSR_0983 (smc)
Archaeal homologous recombinant proteins
HTSR_0983 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_27
AAA_29
AAA_21
AAA_13
MukB
SbcC_Walker_B
AAA_16
Alanine_zipper
Fib_alpha
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AOW80167
UniProt:
A0A1D8S490
LinkDB
All DBs
Position
937009..939678
Genome browser
AA seq
889 aa
AA seq
DB search
MRFDRLSLQNFKCFEDADFRLDTGVTVVHGVNGSGKSSLLEACFFALYGATAIDRTLDEI
VTIGAEETTVDLWFTHEGESYHLHRRIRATGERAVTADCTLEGPNSTLDGVGDVEDRVRS
MLRMDASAFVNSAFVRQGEINKLIEASPGDRKRMIDRLLQLGRLETYRERAAEARLGVEN
LKERRSGRLDSLEEQIAEKDESTLYERANALESAIGDLESEIEQLESGRESARETLSEAE
STLETYEQRREELATITERIETLQERIAEDERRRQELAETITDRRQEIETRTDTIETRAT
ELDLDSTDPDAIEAAIEAAREEKERLTEAIMDLREAVQGAEHEAETATERAKTLQSRATD
RRERASELETKQSQLEAEIEAEREAIEEAAAEIETHLSAFADASIEYGEGESAIEDRREA
LEATRETETERREELATVTSRIEEAESLLEAGKCPECGQPVDGAPKVESLEADREEQERL
EAALESERERRRELEDELDAAEALREHEREIEGLISTVESHGERLAEKRDSLAETRTRRD
ELQSEATDLEDEAAKAEKTAEKAQKRAAETREKIGEHNQERSEYADHIEALESLLETVEA
VESLREEIERAQETRESIDDRNDERRETLTELRERKRTLDEQIDDERVEQARQNREDATD
YLEQVETELAEKREQHDEHRSELGAVQNELEELQALEDQRAAVAETVEALDSLHAELSDL
ESMYARLRTDLRQRNVSRLETLLNETFDLVYRNDSYARIELDGDYELTVYQKDGSPLSPD
QLSGGERALFNLSLRAAIYRLLVEGIDGAAPMPPLILDEPTVFLDSGHVSQLVALVESMR
DLGVEQIIVVSHDEELIGAADDLVRVEKDPTTNRSTVETDGFVLPEADD
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgagattcgaccgactctcgctgcagaacttcaagtgcttcgaagacgccgatttccgg
ctcgataccggcgtgacagtcgttcatggtgtcaacgggagcgggaagtcatcgctgctg
gaagcgtgtttcttcgcgctttacggcgcgacggcgatcgaccgaacgctggacgaaatc
gtcactatcggtgcggaggagacgacagtcgacctctggttcacccacgagggtgagtcc
taccaccttcaccggcggatcagggccacgggcgagcgggccgtgactgccgactgtacg
ctcgaaggaccaaattcgacgcttgacggggtcggggacgtggaggatcgcgttcgatcg
atgctgcgaatggacgcctcggccttcgtgaactccgcgttcgtcaggcagggggagatc
aacaagctcatcgaggcgagccctggcgatcgcaagcggatgatcgaccgcctccttcag
ctcggccgactggagacctatcgcgagcgtgcggccgaggctcgattgggcgtcgaaaat
ctcaaagaacggcgttcgggacgactcgactccctcgaggaacagatcgcggagaaagac
gagtcgaccctttacgagcgggcgaacgcgctggagtcggcgatcggggacctcgaatcc
gagatcgagcaactcgaatcggggcgggagtcggcccgcgagaccctttcggaagcagaa
tcgaccctcgaaacctacgaacagcgccgggaggagctcgcgactatcacggagcgcatt
gagacactgcaggagcgaatcgccgaggacgagcgccgacgccaggagttagcagagacc
atcacggaccggcggcaggagatcgagacccggaccgacactatcgagacgagagccacg
gagctagatctcgactcgaccgatccggacgcgatcgaagcggcaatcgaagcggctcgc
gaggaaaaagagcggctcaccgaggcgatcatggacctccgcgaggccgtgcagggggcc
gaacacgaggccgagaccgcaaccgagcgcgcgaaaacactgcagtcccgagccaccgat
cgccgggagcgtgcctcggagctcgaaacgaagcaatcacagctcgaagccgagatcgag
gccgaacgggaggcaatcgaggaggccgccgcggagatcgaaacccatctctcggccttt
gctgacgcttcgatcgagtacggcgagggggaaagcgctatcgaggaccgtcgggaggcc
ctggaagcgaccagggagacggagacggagcgtcgcgaggaactcgcgactgtaacgtct
cgaatcgaggaggccgaatcgctgctcgaagcggggaagtgcccggaatgtggacaaccc
gtcgacggggcacccaaagtcgagtccctggaggccgaccgcgaggaacaggaacgcctg
gaagcggccctcgaatcggagcgcgagcgccgcagggaactcgaagacgagctggacgcg
gccgaggccctccgggagcacgaacgcgaaatcgagggactgatttcgacggtcgaatcc
cacggtgaacgactcgccgaaaagcgagactcactcgccgaaacccggactcggcgggac
gaactgcagtcggaagccactgacctcgaagacgaggcggcaaaagcagaaaagacggcc
gaaaaggcgcagaaacgggcggcggagactcgcgagaagatcggcgagcacaaccaggaa
cgaagcgagtacgcggatcacatcgaggcccttgagtcgctcctggagacggtcgaagca
gtcgagtcacttcgagaagaaatcgaacgggcccaggagacccgcgagtcgatcgacgac
cgaaacgacgagcgccgggaaacgcttaccgaactacgggagcgcaaacggaccctcgac
gagcagatcgacgacgaacgggtcgaacaggcccggcaaaaccgagaagacgccacggac
tacctcgaacaggtcgagaccgaactcgccgaaaaacgcgagcagcacgacgagcaccgg
agtgaactcggcgcggtccagaacgaattagaggagctccaggcactcgaagaccagcgg
gcggctgtcgcggagaccgtcgaggccctcgactcgttgcatgcggaactctcagatctc
gaatcgatgtacgcccggctccggaccgacctccgccagcgaaacgtctcccggctcgaa
accctgctgaacgagaccttcgatctggtctatcgcaacgattcctacgcccggatcgaa
ctggacggtgactacgagctgacagtctaccagaaggacgggtcgccgctctcgcccgac
cagctctccggtggcgagcgggcgcttttcaacctcagcctccgtgcagcgatctaccgc
ctgctcgtcgagggtatcgacggagccgcgccgatgccaccgctgatactggacgagccg
acggtgttcctcgattccggccacgtctcccagctcgtggccctcgtggagtcgatgcgg
gatctgggcgtcgagcagatcatcgtcgtcagccacgacgaggaactcatcggggccgct
gatgacctcgtccgggtcgagaaagatccgacgaccaaccggtcgacggtcgagactgac
gggttcgtgttgccagaagccgacgattaa
DBGET
integrated database retrieval system
