Halodesulfurarchaeum formicicum HTSR1: HTSR_0986
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Entry
HTSR_0986 CDS
T04517
Symbol
polB
Name
(GenBank) DNA polymerase I
KO
K02319
DNA polymerase, archaea type [EC:
2.7.7.7
]
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HTSR_0986 (polB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halh03032
]
HTSR_0986 (polB)
Enzymes [BR:
halh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HTSR_0986 (polB)
DNA replication proteins [BR:
halh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
B-family DNA polymerases
HTSR_0986 (polB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
DNA_pol_B_exo2
divDNApol
TarH
Motif
Other DBs
NCBI-ProteinID:
AOW80170
UniProt:
A0A1D8S485
LinkDB
All DBs
Position
940242..942914
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AA seq
890 aa
AA seq
DB search
MQNADLSNFGGDPGGAVDSRVAEAEAVAGDADPVVSEIISAEADALPDVEETIDLAVTQV
DYTVEGSGEHERPVIHVFGRTADNDLEHVRVHGFRPYFYAPTATLADGDLTRDVITGHEE
GFESIRGENLTRIYAKTPRDVGNIRDEFDHYEADILFPNRFLVDRDITSGVTVPLRRGED
GAIYAHATEVDPIDMSPDLRVNTFDIEVDDRSGFPEDGEEPIISISSHDSYRDEYIAWLY
EAPEGAGVTPENLANHDPLQDDPSIEVRAFEDEAAMLTAFLDYIDETDPDVLTGWNFADF
DAPYLLDRLDVLGLDSDRLSRVGEVWRSDWQGPSIKGRVVFDLLYGYQRTQFSELDSYRL
EAVAAEEVGVGKERYSGDIGDLWEQDPERLLEYNIRDVELCVEIDRRQNIIDFWEEVAEF
VGCKLEDATTPGDAVDMYVLHKVFGEFAVPSKGTQESEDYEGGAVFDPITGVREMVTVLD
LKSLYPMCMVTINASPETKVDPDQYDGSTYRAPNGTHFRTEPDGIIREMVTELLSEREEK
KARRNEHDPDSENYRLYDQQQAAVKVIMNSLYGVLGWERFRLYDKEMGAAVTATGRSVIE
FTEQAANEQGLEVIYGDTDSVMLELGEGVSVEEAIDRSKELEAYINQSYDDFAKRELDAD
EHRFQIEFEKLYRRFFQAGKKKRYAGHIVWKEGKEVDDIDITGFEYKRSDIAPITKEVQK
TVIERIVTEGDIEGTKEYVHDVIESFQDGQVDLDQVGIPGGIGKRLTDYETDTAHVRGAK
YANLLLGTNFTRGSKPKRVYLKKVHPSFWQRIEAEEPDIAETDLYLEFKRDPDVICYEYA
DQLPEEFSVDWDKMLEKTLKGPIARVLEALSISWEEVRDGQTQTGLGQYM
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgcggacctctcgaatttcggcggcgatcccggcggcgcggtcgactcgcga
gtggcggaggccgaggcggtagccggggacgccgacccggtcgtctccgagatcatctcc
gcggaggcagatgcccttcccgacgtcgaggaaaccatcgacctggcggtcacgcaggtc
gattacaccgtcgaagggtcgggcgaacacgagcgcccggtcattcacgtcttcgggcga
acggcggacaacgacctcgaacacgtccgtgtccacggctttcgcccgtacttctacgcc
ccgacggcgacacttgcggacggtgatctcaccagggacgtaatcaccggccacgaggag
ggcttcgagagcatccgtggcgagaacctgacccggatctacgcgaagaccccgcgggat
gtcggaaacatccgagacgagttcgaccactacgaggcggacatcctcttcccgaaccgc
ttcctggtcgatcgggacatcacgagtggcgtcacggtgccgctgcggcggggtgaggac
ggggctatctacgcgcacgcgaccgaagtcgacccgatcgacatgagccccgacctccgg
gtgaacacgttcgacatcgaagtcgacgatcgatccggcttccccgaggacggcgaagaa
ccgatcatcagcatctccagtcacgactcgtatcgtgacgagtatatcgcctggctttac
gaggcacccgagggagcgggggtgacccctgaaaacttggccaatcacgacccgctccag
gacgacccctcgatcgaggttcgggcattcgaggacgaggccgccatgctcacggcgttt
ttggactacatcgacgagacggacccggacgtgctgacaggatggaacttcgcggacttc
gacgctccctacctcctggatcgactcgacgtgctgggtctcgactcggaccgtctctca
cgcgttggtgaggtctggcgcagcgactggcaggggcccagcatcaagggtcgggtcgtc
ttcgacctcctgtatggctatcagcgcacccagttctccgaactggactcctaccgcctg
gaggcggtggccgccgaggaagtcggtgtcgggaaagagcgatactccggggacatcggg
gacctctgggaacaggaccccgagcgcttgctcgagtacaacatccgtgacgtcgaactc
tgtgtcgagatcgaccggcgacagaacatcatcgacttctgggaggaggtcgcggagttc
gtcgggtgcaaactggaggacgccaccaccccgggggatgcagtggacatgtacgtgctc
cacaaggtgttcggggagttcgcggtgccctcgaagggaacccaggagagcgaggattac
gaaggtggagccgtcttcgatccgataacgggcgtccgcgagatggtgacggtcctggac
ctgaagagtctgtacccgatgtgtatggtgaccatcaacgcgtcgccggagacgaaagtc
gatcccgaccagtacgacggctcgacctaccgggccccgaacggcacgcactttcgaacc
gaaccggacgggatcatccgcgaaatggtcacggaactgctcagcgaacgggaggaaaag
aaggcccggcggaacgagcacgatccggacagcgagaattaccggctctacgatcagcag
caggccgcggtgaaggtcatcatgaactccctgtacggggtgctgggctgggagcggttc
cgcctgtacgacaaggagatgggggccgccgtcaccgccaccggtcgctcggtcatcgag
ttcaccgaacaggccgccaacgaacaggggcttgaggtcatctacggcgacacggacagt
gtgatgctggaactcggggagggcgtctccgtcgaggaggccatcgaccggtccaaagaa
ctcgaggcctacatcaaccagtcctacgacgacttcgcaaagcgggaactcgacgccgac
gaacatcgcttccagatcgagttcgagaagctctatcgacgcttcttccaggcgggcaag
aagaaacgctacgccggtcacatcgtctggaaggagggcaaggaagtcgatgacatcgac
atcacgggcttcgagtacaaacgctcggacatcgccccgatcacgaaagaggtccagaag
accgtgatcgaacgcatcgtcacggagggggatatcgagggcaccaaggagtacgttcac
gacgtcatcgagtccttccaggacgggcaggtcgacctggaccaggtcgggatcccgggc
gggatcggcaaacgcttgaccgactacgagactgacacggcccacgttcgcggggcgaag
tacgcgaacctcctgctgggaacgaacttcacgcgaggaagcaaacctaaacgggtgtat
ctgaagaaagtccatccatccttctggcagcgtatcgaggccgaggaacccgacatcgcg
gagacggacctctacctcgagttcaagcgcgatccggacgtgatctgctatgagtatgcc
gatcagttacccgaggagttcagcgtggactgggacaagatgctcgaaaagaccctgaag
ggcccgatcgcccgagtgctcgaagcgctttccatctcctgggaggaagttcgagacggt
cagacccagaccggcctcggacagtacatgtga
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