KEGG   Halodesulfurarchaeum formicicum HTSR1: HTSR_1080
Entry
HTSR_1080         CDS       T04517                                 
Symbol
rad
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
halh  Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03030  DNA replication
halh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:halh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HTSR_1080 (rad)
   03410 Base excision repair
    HTSR_1080 (rad)
   03450 Non-homologous end-joining
    HTSR_1080 (rad)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:halh03032]
    HTSR_1080 (rad)
   03400 DNA repair and recombination proteins [BR:halh03400]
    HTSR_1080 (rad)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:halh04147]
    HTSR_1080 (rad)
DNA replication proteins [BR:halh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HTSR_1080 (rad)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HTSR_1080 (rad)
DNA repair and recombination proteins [BR:halh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HTSR_1080 (rad)
Exosome [BR:halh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HTSR_1080 (rad)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc OrfB_IS605 SOAR
Other DBs
NCBI-ProteinID: AOW80261
UniProt: A0A1D8S4I1
LinkDB
Position
complement(1024195..1025178)
AA seq 327 aa
MGLADLRQLAVLSEVGYEDLDGDVVAVDAHNWLYRYLTTTVKFTRDSVYTTGAGEEVANL
IGVVQGLPKFFEHDLTPVFVFDGGVTELKTEEVTRRREKREEAEKRMEAAREAGEQIKAA
RLESRTQRLTDVIHRTTRDLLEHLDIPIVEAPAEGEAQAAAMARNDPDVDYAGSEDYDTL
LLGAPYTLRKLTTSDDPELMDFEATLAEHDITWSQLVDIGILCGTDFNEGLRGYGPKTAL
SAVKEHGDLWGVLEAEDEYIEYADQIRDLFLDPDVTTEYDLDLSIDPDIDAARAYVSETW
EIPPEEVARGFERIEDSVAQTGLDQFT
NT seq 984 nt   +upstreamnt  +downstreamnt
atggggctcgcagatctcagacagctggcggtgctctcggaggtgggctacgaggacctg
gacggagacgtagtggccgtcgacgcgcacaactggctctaccgctatctcacgaccacg
gtgaagttcacccgtgattcggtctacacgacgggtgcgggcgaggaagtcgccaacctc
atcggggtcgtccagggactgccgaagttcttcgaacacgatctgacgccggtcttcgtc
ttcgacggcggcgtcactgagctcaagaccgaggaggtgacacgtcgacgcgagaaacgc
gaagaagccgaaaagcgaatggaggcggccagggaggccggcgagcaaatcaaagccgcg
agactggagtcacgaacccagcggctgaccgacgtgatccaccggacgacacgcgacctc
ctcgagcatctcgacatcccgatcgtcgaggccccggccgagggcgaagcccaggccgcc
gcgatggcccgaaacgatcccgacgtggactacgccgggagcgaggactacgacacgctc
ctcctgggggccccctatacgctccgtaagctcaccaccagtgacgacccggagctcatg
gacttcgaagcgaccctcgcggaacacgacatcacgtggtcccaactggtcgatatcggc
atcctctgcgggacggacttcaacgagggccttcggggatacggcccgaagacggccctc
agtgcggtcaaggaacacggcgatctctggggcgtgcttgaggccgaggacgaatacatc
gagtatgccgatcagatccgggacctgttcctcgacccggacgtgacgaccgagtacgac
ctcgacctctcgatcgatccggatatcgacgccgccagggcctacgtcagcgaaacctgg
gagatcccacccgaggaggtcgcccggggcttcgagcggatcgaagattcggtcgcccag
accgggctcgatcaatttacgtaa

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