Halodesulfurarchaeum formicicum HTSR1: HTSR_1098
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Entry
HTSR_1098 CDS
T04517
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halh03400
]
HTSR_1098 (phrB)
Enzymes [BR:
halh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HTSR_1098 (phrB)
DNA repair and recombination proteins [BR:
halh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HTSR_1098 (phrB)
Prokaryotic type
HTSR_1098 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOW80279
UniProt:
A0A1D8S4J4
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All DBs
Position
1039393..1040793
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AA seq
466 aa
AA seq
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MTDSGPTLFWHRRDLRTVDNRGLDAASEHGQVIPVAVVDSAVKAYAGSARSGFYYASLAS
LQQTYRALGTDLEIRQGDPRTVLPELAAETDAERLVWNRDYSKLAKTRDEAVRGRLPEAV
SALEISDMTLHEPGSILTSAGDHYSVFSYYYKKWIDRAAPAPAPQPSPDVFVNRQAPDVG
EIQASPADNLPLPAGRQAARDRMTAFLDGPIYDYADTRDRPAAAGTSRLSQDLAFGLLGI
RELRSAVDEADTAAPTETAMDSVEEYRRQLAWRDFYIQVLDAHPETVSENFKDFEHPIEW
RADPEAFRAWTQGKTGYPIVDAGMRQLQAESFMHNRLRMIVASFLTKDLQLDWREGYAWF
REQLLDHETANDVGGWQWAASTGTDAQPYFRIFNPMTQGKRHDPDAEYIKTYIPELQGVA
PEAIHSWPDLDQDRREELAPDYPDPIVDHAERREETIEMFERARGG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactcgggacccacactgttctggcatcgtcgcgatctccgcacagtcgacaat
cgtggcctggacgctgcgagtgaacacggacaggtgattcctgtcgctgtcgtcgattct
gcagtgaaagcgtatgcgggctccgcccgcagtgggttctattacgcatcactcgcgtcg
ttacagcaaacctatcgcgcgctcgggactgatctggaaatccgtcagggagatccacgg
actgtgctccccgaattggcggcggagacggatgccgaacggctcgtctggaacagggat
tactccaaattggcgaaaacgcgcgacgaggccgttcgcggtcgccttcccgaggcggtg
tcggccctcgaaatttcggacatgacccttcacgaacccggttcgatcctgacctcggct
ggggatcactactcggtgttctcctactactacaagaagtggatcgatcgggccgccccc
gcccccgctccccaaccgtctccggacgtgttcgtcaaccgacaggcacctgatgtcggc
gagatacaggcgtcgcccgccgacaatcttccactcccagccggtcgacaggctgcacgg
gatcgaatgaccgcgttcctggatggcccgatctacgactatgccgacacccgggatcgg
ccggccgcagccgggacctcgcgactctctcaggatctggcgttcggcttgctcgggatt
cgggaacttcggagcgccgtcgacgaggcggacaccgcggcacccaccgagacagcgatg
gattctgtcgaggagtatcgccgtcagcttgcctggcgggatttctacatccaggtactc
gacgcccatcccgagaccgtttcggagaacttcaaggacttcgagcacccgatcgagtgg
cgggctgacccggaggcgtttcgagcctggacccagggcaaaaccggctatccgatcgtc
gacgccggcatgcgccagttacaagccgaatcgttcatgcataaccggttgcgaatgatc
gtcgcctcgtttctgaccaaggatctgcaactcgactggcgagaagggtatgcctggttc
cgcgagcaactcctggatcacgagaccgcaaacgacgtcggggggtggcagtgggcggcc
tcaaccgggaccgacgcccagccgtacttccgaatcttcaatccgatgacccagggcaag
cgtcacgaccccgatgccgagtacatcaaaacctacatcccggagcttcagggcgtcgct
cccgaggccatccattcgtggccggacctcgaccaggacagacgcgaggagttggcccct
gactaccccgatccgatcgtggaccacgccgagcgccgcgaggagacgatcgagatgttc
gaacgggcccggggcgggtaa
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