Halodesulfurarchaeum formicicum HTSR1: HTSR_1131
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Entry
HTSR_1131 CDS
T04517
Name
(GenBank) transcription factor TFIIE subunit alpha
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HTSR_1131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halh03021
]
HTSR_1131
Transcription machinery [BR:
halh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
HTSR_1131
Prokaryotic type
Archaeal type
TFE
HTSR_1131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
DUF7129
Sigma70_r3
Zn_ribbon_LysW
DUF7560
Zn_ribbon_FGT1_2
IBR_1
Zn_ribbon_6
DNA_ligase_ZBD
Zn_ribbon_TFIIB
NRDD
Zn_ribbon_8
Zn_ribbon_Com
HypA
DUF7575
Cas12f1-like_TNB
Acetyltransf_4
Motif
Other DBs
NCBI-ProteinID:
AOW80311
UniProt:
A0A1D8S4N5
LinkDB
All DBs
Position
complement(1069494..1070012)
Genome browser
AA seq
172 aa
AA seq
DB search
MAFEELLEDPVIQKYLNELVGPKGMPVAAAPPDGEVTDEELAERLGLELNDVRRALFILY
ENDLASYRRVRDEDSGWLTYLWTFEYEHIPGNLHEEMERLLEALEERREYELNNEFYLCP
ECSIRFEFGEAMDLGFTCPECGSQLEAMSNDELIGAVDERIGELRSELGLAT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggagctactcgaggaccctgtcatccagaagtacctcaacgagttggtg
gggcccaagggcatgcccgtcgccgcggccccgccggacggtgaggtgaccgacgaggag
ctcgcggagcgactggggctcgaactcaacgacgttcgacgcgccctcttcatcctctac
gagaacgatctggcgtcgtatcgccgcgtccgggacgaggactccggctggctcacctac
ctctggacgttcgaatacgaacacatcccgggcaatctccatgaggagatggaacggctt
ctcgaggcgctggaggaacgccgtgagtacgagttgaacaacgagttttacctctgtccg
gagtgctcgatccgtttcgagttcggcgaagcgatggatctgggctttacgtgtccggag
tgtggatcccagcttgaagcgatgagtaacgacgagttgatcggcgccgtcgacgagcgc
attggcgaactgagaagcgaactcgggctggcgacataa
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