Halodesulfurarchaeum formicicum HTSR1: HTSR_1398
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Entry
HTSR_1398 CDS
T04517
Symbol
nusG
Name
(GenBank) transcription antitermination protein NusG
KO
K15172
transcription elongation factor SPT5
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HTSR_1398 (nusG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halh03021
]
HTSR_1398 (nusG)
03019 Messenger RNA biogenesis [BR:
halh03019
]
HTSR_1398 (nusG)
Transcription machinery [BR:
halh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
HTSR_1398 (nusG)
RNA polymerase I system
HTSR_1398 (nusG)
Messenger RNA biogenesis [BR:
halh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
HTSR_1398 (nusG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
DUF6093
Ribosomal_uL24m-like
KOW4_SPT5
SH3_KIN17_C
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
AOW80574
UniProt:
A0A1D8S5E5
LinkDB
All DBs
Position
1323217..1323654
Genome browser
AA seq
145 aa
AA seq
DB search
MSIYAVKTTASQEQTVASMIANREEKKVHAVLAPESLTSYVMVEAEDTGVLERVLEDIPH
ARSIVPGESSITEVEHFLSPKPDVEGIAEGDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSDER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatatacgccgtcaaaaccacggccagccaggaacagaccgtggcgagcatgatc
gcgaaccgcgaggagaagaaagtccacgccgtgctggccccggagtcactcaccagctac
gtcatggtcgaggccgaggacacgggcgtgctcgagcgggtgctcgaagacattccccac
gcacgaagcatcgtgcccggggagagcagcatcacggaagtcgagcacttcctctcgcca
aagcccgacgtcgagggcatcgcggagggggacatcgtcgaactgatcgccggcccgttc
aagggtgagaaggcccaggtccagcggatcgacgagggcaaggaccaggtgacagtcgaa
ctgtacgaggcgacagtcccgattccggtcacggtccgtggggaccagatccgggtgctg
gacagcgacgagcggtag
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integrated database retrieval system
