Halodesulfurarchaeum formicicum HTSR1: HTSR_1482
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Entry
HTSR_1482 CDS
T04517
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halh03016
]
HTSR_1482 (truD)
Enzymes [BR:
halh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HTSR_1482 (truD)
Transfer RNA biogenesis [BR:
halh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HTSR_1482 (truD)
Prokaryotic type
HTSR_1482 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AOW80658
UniProt:
A0A1D8S5M2
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All DBs
Position
1402794..1404104
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AA seq
436 aa
AA seq
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MMRPAHEEERPYGIEWYASDSDGVGGRLRDRPADFRVRERERFDFHPIETDTGDYPWLVC
RVTLRNTDTNDFARELSNRLSMSRERVRWAGTKDKRAISTQLFTLKGVDPAEVPAIDGAE
IEILGRAGRGLAFGDLLGNDFTVVVRDPDAPNRAETITTELESRFGGRPGVPNYFGHQRF
GSYRSITHEVGLAVLRGDWEGAVMAYLGNPSPHEPASTREAREFVAETRDWETALDRFPN
RLRYERSMLHTLVDSPADFQGALGTFPENLQRLFVNAAQSAVFNRILSQRLDAGLPFHEP
VAGDVVAFADTDAPADFPIPDMDRLQRVSEGRTEVMARHCKRDRAFVTAPLVGTETEFAA
GEPGEIERKAMADLGLEPADFELPEPYHSTGTRRAILLRVDPTIQHDPLTFEFGLPKGSY
ATVLLREYLKVSPRAL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaccggcccacgaggaagaacgcccctacgggatcgagtggtacgcgagcgac
agcgacggcgtcggcggccggctccgggatcgacccgctgacttccgggttcgcgagcga
gagcgcttcgattttcaccccatcgaaaccgacaccggcgattacccctggctcgtctgt
cgggtcacgctgcggaatacggacacgaacgacttcgccagagagctctcgaaccggctc
tcgatgagccgcgagcgagttcgctgggccggcaccaaggacaagcgggcgatctcgacc
cagctgtttaccctcaaaggcgtcgacccggccgaagtccctgccatcgatggggcggag
atcgagatcctcgggcgggccggtcgcgggctggccttcggtgacctgctgggcaacgac
tttacggtcgtggtccgggacccggacgccccgaaccgggccgagacgatcacgaccgaa
ctcgaatcgcggttcggcggccggcccggggtcccgaactacttcggccaccagcggttt
ggcagctatcgctcgatcactcacgaggtcgggctcgccgtcctccggggggactgggag
ggcgcggtgatggcgtacctggggaatccgagcccgcacgagccagcgagcacccgggag
gccagggagttcgtcgccgaaacgcgggactgggaaacggccctggatcgctttccgaac
cgtctgcgctacgagcggtcgatgcttcacacgctagtcgactcgccggcagatttccag
ggggcgcttggaaccttccccgagaacctgcagcgactcttcgtcaacgccgcccagtcg
gccgttttcaaccggattctgagtcagcgactcgacgccgggctcccgttccacgaacca
gtcgccggcgacgtggtcgccttcgccgacaccgacgcgccggcggacttcccgattccg
gatatggaccgtctgcagcgggtgtccgagggtcggaccgaggtgatggcccgtcattgc
aagcgcgaccgggcgttcgtcacggcccccctcgtcgggaccgagaccgagttcgccgcg
ggcgagccgggcgaaatcgagcggaaggcgatggccgacctggggctggagccggcggat
ttcgagctcccagagccgtatcactccaccgggaccagacgggcgattttgcttcgcgtg
gacccgacgatccagcacgatccgctcaccttcgagttcgggctccccaaggggagttac
gccactgtcctcctccgggagtacctcaaggtctcgccccgggcgctgtga
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