Halodesulfurarchaeum formicicum HTSR1: HTSR_1511
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Entry
HTSR_1511 CDS
T04517
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HTSR_1511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halh03400
]
HTSR_1511
Enzymes [BR:
halh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HTSR_1511
DNA repair and recombination proteins [BR:
halh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HTSR_1511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AOW80685
UniProt:
A0A1D8S5R7
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All DBs
Position
complement(1427613..1428443)
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AA seq
276 aa
AA seq
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MQIGAHVSIAGGVDNAVERELAVGGNCGQIFTHSPQVWQTPDIDPEEATDFVEGTAANLA
GPWVIHASYLVNLATPKDDLRRKSIDSMQAEVDAAATLEIPYVNVHLGAHTGAGVEGGIE
NAAAALDELDIPEDVTVLVESDAGSGTKLGGDFEHLAAVLEQSSQDLEVCLDTAHAFAAG
YDLSSPAAVKETVAAFDDVIGLDSLACIHLNDSKHAVGTNKDEHAHLGEGEIGVDGIRSI
LNHEALRELPFVLETPTEDGRGFEWNIDRARELREA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattggagcacacgtctctattgccggtggggtcgacaacgccgtcgagcgagag
ctcgctgtcggcgggaactgtggccagatcttcacgcactccccccaggtctggcagacc
ccggacatcgatcccgaggaggctacggactttgtcgagggcacggcggccaacctcgca
ggcccgtgggtgattcacgcctcgtatctcgtcaatctcgcgaccccgaaagacgacctg
cgacggaaatcgatcgactcgatgcaggccgaagtcgatgccgccgccacactcgagatt
ccttacgtcaacgtccatctcggcgcgcatacgggggcgggagtcgagggcggcatcgag
aacgcggccgccgcactggacgaactcgatattcccgaggacgtgaccgtcctggtcgaa
tccgatgcgggcagcgggacgaaactcggcggtgacttcgaacacctggccgcggtcctg
gaacaatcttcccaggacctcgaggtctgtctcgacaccgcccatgctttcgcggcgggc
tatgacctctcttcgcccgcggcagtcaaggagaccgtcgcggcgttcgatgacgtgatc
gggttggactcacttgcctgcattcacctgaacgattcgaaacacgcggtggggacgaac
aaggacgaacacgcccatctcggtgagggcgagatcggcgtggacggcattcgctcgatt
ttgaaccacgaagccctccgggagcttcctttcgtcctcgagacgcccacggaggacggt
cggggcttcgagtggaacatcgaccgggccagggagctccgagaggcttaa
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