Halodesulfurarchaeum formicicum HTSR1: HTSR_1532
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Entry
HTSR_1532 CDS
T04517
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HTSR_1532 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halh03021
]
HTSR_1532 (rpoA2)
Enzymes [BR:
halh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HTSR_1532 (rpoA2)
Transcription machinery [BR:
halh03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HTSR_1532 (rpoA2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AOW80706
UniProt:
A0A1D8S5S1
LinkDB
All DBs
Position
complement(1452315..1453499)
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AA seq
394 aa
AA seq
DB search
MTTITDDIEALVEDSDLTRRLKDEVYETIEERSVTTEEAAQIVDAVEAQYVDTRVDPLDP
VGTVSAQSIGEPGTQMTMNTFHYAGVAEIDVTQGLPRLIELVDARKTPDTPMMTVHLDEE
YATERDRAHEVVWQIEATKILALGDISTNVADMIVRIDLNEDTLEERWPTVPDTAEVAAE
IADVIRGELGVEVRRDGMILEFGPERPSYRELLQLVEQLRDVVFKGIEEVSRVVIRKEET
EKGEEFVLYTEGSAFKDVLDIEGVDASRTTCNNIHEIYEVLGVEAAREAIIEETRDTLEE
QGLGDVNIRHLMLVADIMTNEGTIESIGRHGISGNKKSVLARAAFEVTVNHLLDAAIHGE
VDDLDGVIENVIVGKPVKLGTGDVDLRMRASRSD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgacgactattacagacgacatcgaggccctcgtcgaggattcggatctcacgcgccgc
ctcaaagacgaggtctacgagacgatcgaggaacgctccgtcaccacggaggaggccgca
cagatcgtcgatgcggtcgaggcccagtacgtcgacacccgggtcgacccgctcgatccg
gtgggcaccgtctccgcccagtcgatcggggaacccggaacccagatgacgatgaacacc
ttccactacgcgggcgtggctgagatcgacgtcacgcagggcctgccacgactgatcgaa
ctcgtggacgcccggaagaccccggataccccgatgatgaccgtccatctggacgaggag
tacgcgaccgagcgggaccgggcccacgaggtcgtctggcagatcgaggcgacgaagatc
ctcgcgctgggggacatctcgacgaacgtcgcggacatgatcgtccgcatcgacctcaac
gaggacacactcgaagagcgctggcccacggtgcccgacaccgctgaagtcgccgccgag
atcgccgacgtgattcggggcgaactcggcgtggaggtccgtcgcgacggcatgatcctg
gagttcggtcccgagcggccgagctaccgcgaactcctccagctcgtcgagcagcttcgg
gacgtggtgttcaaggggatcgaggaggtctcccgggtcgtcatccggaaggaggagacc
gaaaagggcgaggagttcgtcctctacaccgagggctcggcgttcaaggacgtcctcgac
atcgagggtgttgatgcctcccggacgacgtgtaacaacatccacgagatctacgaggtc
cttggcgttgaggccgcccgcgaggccatcatcgaggagacccgggacaccctcgaggaa
cagggccttggcgacgtgaacatccgccacctcatgctggtcgcggacatcatgaccaac
gaggggacgatcgagtcgatcggccgccacggcatctcgggcaacaagaagagcgtgctt
gcgcgggccgccttcgaggtgacggtgaaccaccttctcgatgcggccatccacggcgag
gtcgacgatctggacggcgtgatcgagaacgtcatcgtcggcaagccggtaaaactcggg
actggcgacgtcgacctgcggatgcgggcgagtcgctcggactga
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