Halodesulfurarchaeum formicicum HTSR1: HTSR_1562
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Entry
HTSR_1562 CDS
T04517
Name
(GenBank) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HTSR_1562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halh03019
]
HTSR_1562
03016 Transfer RNA biogenesis [BR:
halh03016
]
HTSR_1562
03012 Translation factors [BR:
halh03012
]
HTSR_1562
04131 Membrane trafficking [BR:
halh04131
]
HTSR_1562
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
halh04147
]
HTSR_1562
Messenger RNA biogenesis [BR:
halh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
HTSR_1562
Transfer RNA biogenesis [BR:
halh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
HTSR_1562
Translation factors [BR:
halh03012
]
Eukaryotic type
Elongation factors
HTSR_1562
Membrane trafficking [BR:
halh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
HTSR_1562
Exosome [BR:
halh04147
]
Exosomal proteins
Proteins found in most exosomes
HTSR_1562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
RsgA_GTPase
Ras
FeoB_N
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
AOW80735
UniProt:
A0A1D8S5W9
LinkDB
All DBs
Position
1485249..1486475
Genome browser
AA seq
408 aa
AA seq
DB search
MDHGKSTLVGRLLFETGSVPEHVIEQHREEAEEKGKGGFEFAYVMDNLAEERERGVTIDI
AHQEFETDTYNYTIVDTPGHRDFVKNMITGASQADNAVLVVAADDGVQPQTQEHVFLART
LGIEELIIGVNKMDLVDYEQNTYDETVEEVKGLLKQVQFDSDNASFIPISAFEGDNISEH
SENTPWYDGETILEALNGLPEPSPPTDAPLRLPIQDVYTISGIGTVPVGRVETGTMHPGD
MVSFQPSDVGGEVKTIEMHHEEVDMAGPGDNVGFNVRGIGKDDIRRGDVLGPADDPPTVA
ETFTAQIVVMQHPSVITAGYTPVFHAHTAQVACTIEEINKKIDPSSGQVEEENPDFIQSG
DAAVVTVRPQKPFSIEPSSEIPELGSFAVRDMGQTIAAGKVLDVTESE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtggaccacgggaagagtacgctcgtgggccgactcctcttcgaaacggggagcgttccc
gagcacgtcatcgaacagcaccgagaagaagccgaagagaagggcaagggcggattcgag
ttcgcctacgtcatggacaacctcgccgaggagcgtgagcgtggggtcaccatcgacatc
gcccaccaggagttcgagacggacacatacaactacaccatcgtcgacacgccgggtcac
cgtgacttcgtgaagaacatgatcacgggggcctcccaggctgacaacgccgttctcgtc
gtcgcggcggacgacggcgtccagccgcagacccaggagcacgtcttcctggctcgcacc
ctcggtatcgaggaactcatcatcggcgtcaacaagatggacctcgtcgactacgagcag
aacacctacgacgagaccgtcgaggaagtcaagggactgctcaagcaggtccagttcgac
tcggacaacgcgagtttcatcccgatctcggccttcgagggcgacaacatctccgaacac
tcggagaacacgccgtggtacgacggcgagaccatcctcgaggcactcaacggcctgccc
gagccctcgccgccgacggacgcgccgctccgcctgccgatccaggacgtctacaccatc
tccggcatcgggacggtcccggtcggccgcgtcgagaccggtaccatgcaccccggtgac
atggtctccttccagccctccgacgtcggtggggaggtcaagaccatcgagatgcaccac
gaggaagtcgacatggccggccccggtgacaacgtcgggttcaacgtccgtggcatcggc
aaggacgacatccgccgcggtgacgtcctcggtcccgccgacgatccgcccacggtcgcc
gagaccttcacggcccagatcgtcgtgatgcagcatccgagtgtcatcactgccggctac
accccggtcttccacgcgcacacggcgcaggtcgcctgtaccatcgaggagatcaacaag
aagatcgacccgtcctcgggtcaggtcgaggaggagaaccccgacttcatccagtccggc
gacgctgcggtcgtcaccgtgcgcccgcagaagccgttcagcatcgagccgtccagcgag
atccccgaactgggctccttcgcggttcgtgacatgggtcagaccatcgccgccgggaag
gtcctggacgtcaccgaatccgaataa
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