KEGG   Halodesulfurarchaeum formicicum HTSR1: HTSR_1562
Entry
HTSR_1562         CDS       T04517                                 
Name
(GenBank) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
halh  Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:halh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    HTSR_1562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:halh03019]
    HTSR_1562
   03016 Transfer RNA biogenesis [BR:halh03016]
    HTSR_1562
   03012 Translation factors [BR:halh03012]
    HTSR_1562
   04131 Membrane trafficking [BR:halh04131]
    HTSR_1562
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:halh04147]
    HTSR_1562
Messenger RNA biogenesis [BR:halh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     HTSR_1562
Transfer RNA biogenesis [BR:halh03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    HTSR_1562
Translation factors [BR:halh03012]
 Eukaryotic type
  Elongation factors
   HTSR_1562
Membrane trafficking [BR:halh04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    HTSR_1562
Exosome [BR:halh04147]
 Exosomal proteins
  Proteins found in most exosomes
   HTSR_1562
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 RsgA_GTPase Ras FeoB_N Dynamin_N
Other DBs
NCBI-ProteinID: AOW80735
UniProt: A0A1D8S5W9
LinkDB
Position
1485249..1486475
AA seq 408 aa
MDHGKSTLVGRLLFETGSVPEHVIEQHREEAEEKGKGGFEFAYVMDNLAEERERGVTIDI
AHQEFETDTYNYTIVDTPGHRDFVKNMITGASQADNAVLVVAADDGVQPQTQEHVFLART
LGIEELIIGVNKMDLVDYEQNTYDETVEEVKGLLKQVQFDSDNASFIPISAFEGDNISEH
SENTPWYDGETILEALNGLPEPSPPTDAPLRLPIQDVYTISGIGTVPVGRVETGTMHPGD
MVSFQPSDVGGEVKTIEMHHEEVDMAGPGDNVGFNVRGIGKDDIRRGDVLGPADDPPTVA
ETFTAQIVVMQHPSVITAGYTPVFHAHTAQVACTIEEINKKIDPSSGQVEEENPDFIQSG
DAAVVTVRPQKPFSIEPSSEIPELGSFAVRDMGQTIAAGKVLDVTESE
NT seq 1227 nt   +upstreamnt  +downstreamnt
gtggaccacgggaagagtacgctcgtgggccgactcctcttcgaaacggggagcgttccc
gagcacgtcatcgaacagcaccgagaagaagccgaagagaagggcaagggcggattcgag
ttcgcctacgtcatggacaacctcgccgaggagcgtgagcgtggggtcaccatcgacatc
gcccaccaggagttcgagacggacacatacaactacaccatcgtcgacacgccgggtcac
cgtgacttcgtgaagaacatgatcacgggggcctcccaggctgacaacgccgttctcgtc
gtcgcggcggacgacggcgtccagccgcagacccaggagcacgtcttcctggctcgcacc
ctcggtatcgaggaactcatcatcggcgtcaacaagatggacctcgtcgactacgagcag
aacacctacgacgagaccgtcgaggaagtcaagggactgctcaagcaggtccagttcgac
tcggacaacgcgagtttcatcccgatctcggccttcgagggcgacaacatctccgaacac
tcggagaacacgccgtggtacgacggcgagaccatcctcgaggcactcaacggcctgccc
gagccctcgccgccgacggacgcgccgctccgcctgccgatccaggacgtctacaccatc
tccggcatcgggacggtcccggtcggccgcgtcgagaccggtaccatgcaccccggtgac
atggtctccttccagccctccgacgtcggtggggaggtcaagaccatcgagatgcaccac
gaggaagtcgacatggccggccccggtgacaacgtcgggttcaacgtccgtggcatcggc
aaggacgacatccgccgcggtgacgtcctcggtcccgccgacgatccgcccacggtcgcc
gagaccttcacggcccagatcgtcgtgatgcagcatccgagtgtcatcactgccggctac
accccggtcttccacgcgcacacggcgcaggtcgcctgtaccatcgaggagatcaacaag
aagatcgacccgtcctcgggtcaggtcgaggaggagaaccccgacttcatccagtccggc
gacgctgcggtcgtcaccgtgcgcccgcagaagccgttcagcatcgagccgtccagcgag
atccccgaactgggctccttcgcggttcgtgacatgggtcagaccatcgccgccgggaag
gtcctggacgtcaccgaatccgaataa

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