Halodesulfurarchaeum formicicum HTSR1: HTSR_1598
Help
Entry
HTSR_1598 CDS
T04517
Name
(GenBank) RNA-binding protein
KO
K22469
ribonuclease FAU-1 [EC:3.1.26.-]
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
halh03009
]
HTSR_1598
Ribosome biogenesis [BR:
halh03009
]
Prokaryotic type
rRNA processing factors
HTSR_1598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF402
S1
S1_2
AAA_lid_9
Motif
Other DBs
NCBI-ProteinID:
AOW80770
UniProt:
A0A1D8S5Y3
LinkDB
All DBs
Position
complement(1519514..1520932)
Genome browser
AA seq
472 aa
AA seq
DB search
MTDGEDTPAVRVRGIYATALTELLRESGAAQVVDPSPAIAARFDGGFPAAAPVATVDMTA
DRLGVSISGAPTATETVADQLAAVAIDTFDWTDPAPASAIFEGEVTETAGRGLIVDLDGT
EGYLPNRATNDDLDVGESVRVQVQEPAPPWRDSRPRLGTTLRSPGGLATLVRGVDALVAD
TPDGSADHELARTTELLPVSIPENWGVEWASGAAEAEMATLEAALQRAVEHAREIESALD
GATGPIARPQATNWLRFGRETRFALDEYRSAVTETIPGHHRIKAGGEDAGTAVDFVESLG
QAIETFPFGPVTDALGPAVEESVRIVHSKPDGQEFALGRGTVTDRSTEKERVTVERELTS
AGTYDALGTAREPGDTATTRFAEGRWWYPTVYRGTDGTPKGTYVNIATPVEVFPDAVRYV
DLYIDVIKKPDGTVEIVDAAELEAAVQNGHVPEAVAERATDVAERVKTVLSG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggcgaggacaccccggccgttcgcgtgcgggggatctacgcgacggccctg
accgaactgctccgcgagtcgggagccgcccaggtggtcgacccctccccggcgatcgcg
gcgcggttcgacggcgggttcccggcggcagctcccgtggcgaccgtggacatgaccgcg
gaccggctcggggtctcgatttcgggtgccccgaccgccactgaaacagttgccgaccag
ctcgctgcggtcgcgatcgacaccttcgactggacagacccggctccagcaagcgcgatt
ttcgagggcgaggtcacggagacggccggtcgggggctgatcgtcgatctcgatggaact
gagggttatctcccaaatcgggcgacgaacgacgacctcgacgtgggcgagtcggtccgc
gtccaggtacaggagccggccccgccctggcgggactcgcggccccggcttggaacgacg
ctgcgctcccctggtgggctcgcgaccttggtcaggggcgttgacgcgctggtggccgat
acccccgatggcagcgcggatcacgaactcgcccggacgaccgagctgctaccggtctcg
atccccgagaactggggcgtcgaatgggcctccggagcggccgaggccgagatggcgacg
ctcgaagccgccctccagcgagcggtcgagcacgcccgcgagatcgaatctgcgctggat
ggtgccacaggtccgatcgcccggccccaggccacgaattggctgcggttcggtcgggaa
acgcggttcgcacttgacgagtaccgctcggcggtgaccgagacgatcccgggccaccac
cgcatcaaggccggcggtgaggacgccggaacggcagtcgacttcgtcgagtccctcggc
caggcaatcgagaccttccccttcgggcccgtgaccgacgcgctcggaccggcggtcgag
gagtccgttcgaatcgttcacagcaagccagacgggcaggagttcgcgctcggccggggg
accgtgaccgaccgctcgaccgagaaagaacgggtcaccgtcgaacgggagctgacgagt
gccggcacgtacgacgcgcttggaaccgctcgcgaaccgggagacacggcgaccacccgc
tttgccgaggggcggtggtggtatccaaccgtctaccgaggcacggacgggacgccgaaa
ggcacctacgtgaacatcgcgacgccggtcgaggtgttccccgacgccgtccggtacgtg
gacctgtacatcgacgtgatcaagaagccggacggcactgtcgagatcgtggacgccgcg
gaactcgaagcggcggtccagaacggccacgtcccggaagcggttgccgaacgggcgacg
gacgtcgccgaacgcgtgaaaacggttctctccgggtag
DBGET
integrated database retrieval system