Halodesulfurarchaeum formicicum HTSR1: HTSR_1685
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Entry
HTSR_1685 CDS
T04517
Name
(GenBank) PAS sensor histidine kinase
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halh03000
]
HTSR_1685
Transcription factors [BR:
halh03000
]
Prokaryotic type
Helix-turn-helix
Other families
HTSR_1685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_4
PAS
PAS_9
BAT
HTH_10
GAF_2
PAS_8
GAF_3
GAF
Diguanyl_cycl_sensor
PAS_11
HTH_11
Sigma70_r4
CCB2_CCB4
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AOW80855
UniProt:
A0A1D8S667
LinkDB
All DBs
Position
1596900..1600784
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AA seq
1294 aa
AA seq
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MDDGTTLRSALFEASGALLLGIDAATGEIVEANERASEVLGQSQADLLGSTVSTATGFTD
LEAMLARVPAPDASHEFTTTGLHPDGAQSPAVTLTRRPVAHDRDEYIVLTGQVYPDGEPD
EGESAVRWNILEDLIEQISDAAFVHDEAGRFRAVNQAAIDLLGYAEDELLGADPSLFDPA
VSESHLGPRLAELEREESVQFEATYVTASGEEVPVEITSSLLSCTDQRVIVSVARNLQAK
KQRIRNRELAETLFEDHREATFIVDVDEEFTIERVNPAYEEASPLSAADIEGKTPREIFG
AKRGGEIADRYRRCVENRESLDVEQTLEMDGRQTHWWTRLAPVVVEDEVQYIVGSTREIT
DRKNRERQIETHLREAQRIANITSWYYDLRDVSGNERFTGEKFMGQVHPADRDRVEGQWE
RVLESGGSYDIEYRVKLGAEIRWMREKVESFSEPGHAEPVEAIGVVQDITDRKERELELE
RYELFLESIQDAVTVIDAEGRLQYESPGIEAIVGQYPSGRVGADAFEFIHPADRELVREE
FTRRLHGDQSVEPLEYRIRTTDGSWTWVESRGQALLEDHDFEGLVVTSRDVSAQKEQQRQ
LDTLISNLPGIVYRCKNEQGWPMELVRGRAKELTGYTAKELVSGAVNWEEALVHPEDRAR
VREQTSAAVDAGRPFTVTYRIRTRNGEEKWLWEQGQPVTQIGAQEPKLEGFITDITDRKR
REQELERRSQRLHELVGATRELLTAKSKPALYEGVIDAVWETLSVARFAVLGYDEAAGVL
RAQAVSPAMETPADAVPPIEPGQHSIWESYRAQETDRLTMTDTPWAPAEGTNMQDLLVVP
IGAFGLLLVGIEPDTTVSADDRQWLELIATNAAAILERIEQEHKRRQADEQLQTQQTRTA
ELTDLLNAVEAIQRRFAESDTREELEASVCEEVVRTDPVDFAWIGRPEANDAELTPAAWA
GEDRGYLDAIDTTTVDGARCPAQQAADDHRLRNVSQIPRNVPEQPWATQALTGRFRSVLA
IPLEQDDVLYGVLTVFSRQAEAFGDLYESLLADVGSLLATSIRTVTIRNAGAASDTVEVE
FSIQDPQYPLYRVAERTDSEIRFETILATTDGTVTELWTVLDGDPEAVFEAVQENTKIVS
ADWFGAPEHGQLTVEMAKPMLADGIRDHGGRLAEAIGTPTGATVTLVQTAEQPVRPIIAW
VSTQYTDVELTARRTRTPQDAGLLTSTSELLTDRQREILRAAYYGGYYETPKQITGEELG
TSFDISRPAVYKHLQAAQRKLLRALFDDGATLHS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggatgacggaaccacgctccgctcggcgctgttcgaggcaagcggagcgctgttactc
gggatcgacgccgccactggggagatcgtcgaggccaacgagcgggccagcgaagtcctc
gggcagtcacaggcggacctcctggggtcgacggtcagcacggcgacggggttcaccgac
ctcgaagcgatgctcgcccgagtgccagcccccgatgccagccacgagttcacgacgacg
ggcctgcatccggacggcgctcagtccccagcggtgacactcacccgtcggccagtcgcc
cacgaccgggatgaatacatcgtgctgaccgggcaggtctatcccgacggagaacccgac
gagggagagtctgcggtccgatggaacattctggaggatttgatcgagcagatcagcgac
gcggccttcgtccacgacgaggctggccgttttcgagcggtcaatcaggccgcgatcgac
ctgctgggttacgcggaggacgaactgctgggggccgatccgtcgctgttcgatccggcg
gtctccgagtcccacctcgggccccggctggcggaactcgaacgcgaggagtccgtgcag
ttcgaggccacctacgtcacggcgagtggagaagaagtccccgtcgagatcacctcgtcg
ctgctttcctgtacggaccagcgggtcatcgtgagtgtcgcacggaacctgcaggccaaa
aaacagcggattcgaaaccgtgagctggccgagacgctgttcgaggaccaccgggaggcc
accttcatcgtcgacgtcgacgaggagttcaccatcgaacgggtcaatccggcctacgag
gaggcgagcccgctttcggccgccgacatcgaggggaagaccccccgggagatcttcggg
gcgaagcggggcggggagattgccgatcggtatcgacgctgtgtggaaaatcgggagtcc
ctcgacgtggaacagaccctggagatggacggccgccagacccactggtggacccgactg
gcgccggtcgtcgtcgaggacgaggtgcagtacatcgtgggctcgacccgggagatcacc
gaccgcaagaaccgggaacgacagatcgagacccacctgcgtgaggcccagcggatcgcg
aacatcaccagctggtactacgacctgcgggacgtctccggcaacgagcggttcaccggc
gagaagttcatgggccaggtccaccccgccgaccgcgaccgcgtcgaagggcagtgggag
cgggtcctcgaatccgggggcagctacgacatcgaatatcgggtgaagttgggcgcggag
atccgctggatgcgcgagaaagtcgagtcgttcagcgagcccggccacgcggaacccgtc
gaggcgatcggagtcgtccaggacatcaccgaccgcaaggaacgggaactcgaactcgaa
cgctacgagctcttcctggagagcattcaggacgccgtgaccgtgatcgacgccgaggga
cgcctccagtacgagagtcccggcatcgaggcgatcgtggggcagtatccctccggccgg
gtcggtgcggacgccttcgagttcatccatccggccgaccgcgaactcgtcagagaagag
tttacccggcggttgcacggcgaccagtcggtcgagcccctggagtaccggattcgaacc
acggacggatcctggacctgggtggagagccgcgggcaggccctcctcgaggatcacgac
ttcgaggggctggtggtcacgagccgtgacgtctcggcccagaaggaacaacagcgccaa
ctggacaccctcatcagcaacctgccggggatcgtctaccgctgtaagaacgaacagggc
tggccgatggagctggtccgcggccgggccaaagagttgaccggctacacggcgaaggaa
ctcgtctcgggggcggtcaactgggaggaagcgctcgtccatcccgaagatcgagcgcga
gtcagagaacagacgagcgccgccgtcgacgccgggcggcccttcacggtgacctatcgg
attcgcacccgcaatggcgaggagaagtggctctgggagcaaggccagccggtcacccag
atcggggcccaggagccgaaactggagggctttatcaccgacatcaccgaccggaagcga
cgcgagcaggagctcgaacggcgcagccagcgcctgcacgagttagtgggggcgactcgc
gaactgttgaccgcgaagtcgaaaccggccctctacgaaggggtcatcgacgcggtctgg
gaaaccctctctgtcgcccgctttgccgtgcttggctacgacgaggccgctggcgtgttg
cgggcccaggccgtctcgccggcgatggagacccccgccgacgccgtgcccccgatcgaa
cccggacagcactcgatctgggagagctaccgggcacaggagaccgaccgcctcacgatg
acggacacaccctgggccccggcggaggggaccaatatgcaggacctgctcgtcgtcccg
atcggggccttcggcctcctgctggtcgggatcgagccggacacgaccgtgtctgcggac
gaccgacagtggctggagctcatcgcgaccaacgccgcggccatcctcgaacgcatcgag
caggaacacaagcgccgacaggccgacgaacagctccagacccagcagacccgcacggcc
gaattgaccgacctgctgaacgccgtggaggcgatccagcggcgcttcgccgagagtgac
acccgcgaggaactcgaggcaagtgtctgtgaggaggtggtcaggaccgacccggtggac
ttcgcgtggatcggccggccggaggcaaacgacgccgaactcacgcccgcggcctgggcc
ggcgaggaccggggctatctggacgcgatcgacaccacgaccgtcgacggggcgcgctgt
cccgcccagcaggccgccgacgaccaccggctgcgaaacgtctcacagatcccgcggaac
gtgcccgaacaaccctgggcgacccaggcgctgaccggtcggttccgatcggtccttgcc
atcccgctcgaacaggacgatgtcctctatggcgtgttgaccgtcttcagccgacaggcc
gaggccttcggtgacctgtacgagtccctgctcgcggacgtcgggtcgctgctggcgacc
tcgattcgcaccgtgaccatccggaacgccggcgcggcgtcagataccgtcgaggtggaa
ttttcgatccaggaccctcagtatccactctaccgggtggccgagcgaaccgacagcgag
atccggttcgagacgatcctggcgacgaccgacggaacggtcacggagctctggacggtc
ctggacggggacccggaggcggtcttcgaggcagttcaggagaacacgaagatcgtctcg
gccgactggtttggcgccccggaacacgggcagctaaccgtcgaaatggccaaaccgatg
ctcgcggacgggatcagggaccacggcggccggctcgccgaagccatcgggaccccaaca
ggcgcgacggtcaccctcgttcagaccgcggagcagccggttcggccgatcatcgcctgg
gtgagcacccagtacacggacgtcgaactgacggcccggcgaacccgaacgccccaggat
gcggggcttttgaccagcacgagtgagctgctgaccgaccgacagcgtgagatcctccgg
gcggcctactacggcgggtactacgagacgccaaagcagatcacgggcgaggagctcggg
accagtttcgacatctcgcgtccggccgtctacaaacacctgcaagcggcccaacgtaaa
ctcctgcgggcactgttcgacgacggtgcaaccctccacagttaa
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