Halodesulfurarchaeum formicicum HTSR1: HTSR_1780
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Entry
HTSR_1780 CDS
T04517
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HTSR_1780 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halh03400
]
HTSR_1780 (alkA)
Enzymes [BR:
halh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HTSR_1780 (alkA)
DNA repair and recombination proteins [BR:
halh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HTSR_1780 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NpmA
HHH
Motif
Other DBs
NCBI-ProteinID:
AOW80948
UniProt:
A0A1D8S6J2
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All DBs
Position
1712123..1712716
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AA seq
197 aa
AA seq
DB search
MPVEELAHPTAAHEHLQTDPTMAELVSQHGYLGVEPAADPFRRLLKSIVRQQVSMAAAEA
TWERLTAAFEVTPAAMLAAEPAALQAVGLSEAKSEYVRSVARVFQDRGWSRSSFEKLDNR
AVMDSLTDIRGIGPWTAKMFLQFGLGREDVFPVEDLGVRRAMTELYGDETRDAMTERATT
WAPYRSIGSLYLWRAQD
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgaggaactggcccacccgaccgcggcccacgaacacctgcagaccgatcca
acgatggccgaactggtgtcccagcacggctatctcggcgtcgagcccgctgcggacccg
tttcgacggctgctcaaatcgatcgtccgccagcaggtctcgatggccgcggccgaggcg
acctgggagcgactgaccgcggcgttcgaggtgacccccgcggcgatgctggcagccgag
ccggcggccctccaggctgtcggcctctccgaagcgaaaagcgagtacgtccggagcgtg
gcccgggtcttccaggatcggggctggtccaggtccagcttcgagaagctagacaatcgt
gccgtgatggactcgctgaccgacatccggggcatcgggccctggaccgcgaaaatgttt
ctccaattcggactgggcagagaagacgtgttcccggtcgaggatctgggcgttcgacgg
gccatgaccgagctgtacggcgacgaaacgcgagatgcaatgaccgagcgagccaccacg
tgggccccgtatcgatcgatcgggtcgctgtacctgtggcgagcccaggactga
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