Halodesulfurarchaeum formicicum HTSR1: HTSR_1782
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Entry
HTSR_1782 CDS
T04517
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03030
DNA replication
halh03420
Nucleotide excision repair
halh03430
Mismatch repair
halh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HTSR_1782
03420 Nucleotide excision repair
HTSR_1782
03430 Mismatch repair
HTSR_1782
03440 Homologous recombination
HTSR_1782
03460 Fanconi anemia pathway
HTSR_1782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halh03000
]
HTSR_1782
03032 DNA replication proteins [BR:
halh03032
]
HTSR_1782
03400 DNA repair and recombination proteins [BR:
halh03400
]
HTSR_1782
Transcription factors [BR:
halh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
HTSR_1782
DNA replication proteins [BR:
halh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
HTSR_1782
DNA repair and recombination proteins [BR:
halh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
HTSR_1782
MMR (mismatch excision repair)
HTSR_1782
DSBR (double strand breaks repair)
HR (homologous recombination)
HTSR_1782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Ssb-like_OB
SHLD2_OB1
Motif
Other DBs
NCBI-ProteinID:
AOW80950
UniProt:
A0A1D8S6H3
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All DBs
Position
1713206..1714618
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AA seq
470 aa
AA seq
DB search
MGDIETIYEDLDTEEVSLEEFRAAVESKVEQMGGLADEETAAMLIAHELEDGQVSGLADV
EPGMDEVSVTAKVINVGELRTFERDDPDQPEGQVINADVADETGRLRVSFWDEMASAAES
DLEAGQVLNINGRPKDGYDGVEVTVDQVEPAPDTEIEVTLTEEYRVSDLTLGASDVTLLG
EVLATEPVRTFDRDDGSEGKVSNVLVGDETGRVRVTLWDDQADQAEAFEPHDVVEIIDGY
VRERDGRLELHVGDRGAINRTDTEVSYVPDTTDIEAVELDDTVDISGVVRSADPKRTFDR
DDGSEGQVRNVRVQDETDDIRVALWGEKADLDLGPGDEVLFVDVAIQDGWQDDLEASANW
QSTIVLLEDGVESDDGATESEPTGETDTGLSAFADGSSPATSTESATENEAQDGEEVEFT
GVVVQARDPVILDDGERTVTLRTEVDAELGEELTVRGELADGTLDPDAVE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatatcgagacgatctacgaggatctcgacacggaggaggtctccctcgaggag
ttccgggcggccgtcgagtccaaagtcgagcagatgggcgggctcgcggacgaggagacg
gccgcgatgctcatcgcccacgaactcgaagatgggcaggtatcgggactcgcggacgtc
gagcccgggatggacgaggtctcggtcaccgcgaaggtcatcaacgtcggggagttgcgg
accttcgagcgggacgatcccgaccagcccgagggccaggtgatcaacgccgacgtggcc
gacgagacgggccgactccgggtctcgttctgggacgagatggcgagtgcggccgaatcg
gacctcgaagcagggcaagtactcaacatcaacggccggccgaaggatggctacgacggc
gtggaggtcaccgtcgaccaggtcgaaccggcacccgacacggagatcgaggtcacgctc
accgaggagtaccgcgtctcggatctcacgctcggcgcgtcggatgtcaccctgctgggc
gaagtcctggcgaccgagcccgtccggaccttcgaccgggacgacggctcggaggggaag
gtctcgaacgtgctggtcggcgacgagacgggtcgggtccgggtcactctctgggacgac
caggccgaccaggccgaggccttcgagccccacgatgtcgtcgagatcatcgacggctac
gtccgagagcgggacggccgactggaactgcacgtgggcgaccggggcgccatcaatcga
actgacacagaggtgtcctacgtccccgacacgacggacatcgaggccgtcgaactcgac
gacaccgtcgacatctcgggggtcgtgcgctccgcggacccgaaacgcaccttcgaccgg
gacgacggctccgagggccaggtccggaacgtccgcgtgcaggacgagacagacgacatc
cgggtcgcactctggggcgagaaggcggacctggacctcggcccgggcgacgaggtgctg
ttcgtggacgtggcgatccaggacggctggcaggacgacctggaggcctccgcgaactgg
cagtccaccatcgtgttgctggaggacggggtcgagtccgatgacggggccaccgagagc
gagccaacgggcgaaaccgacaccgggctctcggccttcgccgacggctcctcaccagcc
acgagcaccgagtcggccaccgagaacgaggctcaggatggggaggaagtcgagttcacg
ggtgtggtcgtgcaggccagggacccggtcatcctggacgacggggaacggaccgtgacg
ctgcgaaccgaggttgacgccgaactcggcgaggaactgacagttcgtggggaactcgcg
gacggaacactcgatcccgacgccgtcgagtga
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