KEGG   Halodesulfurarchaeum formicicum HTSR1: HTSR_1782
Entry
HTSR_1782         CDS       T04517                                 
Name
(GenBank) replication factor A
  KO
K07466  replication factor A1
Organism
halh  Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03030  DNA replication
halh03420  Nucleotide excision repair
halh03430  Mismatch repair
halh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:halh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HTSR_1782
   03420 Nucleotide excision repair
    HTSR_1782
   03430 Mismatch repair
    HTSR_1782
   03440 Homologous recombination
    HTSR_1782
   03460 Fanconi anemia pathway
    HTSR_1782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:halh03000]
    HTSR_1782
   03032 DNA replication proteins [BR:halh03032]
    HTSR_1782
   03400 DNA repair and recombination proteins [BR:halh03400]
    HTSR_1782
Transcription factors [BR:halh03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    HTSR_1782
DNA replication proteins [BR:halh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    HTSR_1782
DNA repair and recombination proteins [BR:halh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     HTSR_1782
   MMR (mismatch excision repair)
     HTSR_1782
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     HTSR_1782
SSDB
Motif
Pfam: tRNA_anti-codon REPA_OB_2 CDC24_OB3 Ssb-like_OB SHLD2_OB1
Other DBs
NCBI-ProteinID: AOW80950
UniProt: A0A1D8S6H3
LinkDB
Position
1713206..1714618
AA seq 470 aa
MGDIETIYEDLDTEEVSLEEFRAAVESKVEQMGGLADEETAAMLIAHELEDGQVSGLADV
EPGMDEVSVTAKVINVGELRTFERDDPDQPEGQVINADVADETGRLRVSFWDEMASAAES
DLEAGQVLNINGRPKDGYDGVEVTVDQVEPAPDTEIEVTLTEEYRVSDLTLGASDVTLLG
EVLATEPVRTFDRDDGSEGKVSNVLVGDETGRVRVTLWDDQADQAEAFEPHDVVEIIDGY
VRERDGRLELHVGDRGAINRTDTEVSYVPDTTDIEAVELDDTVDISGVVRSADPKRTFDR
DDGSEGQVRNVRVQDETDDIRVALWGEKADLDLGPGDEVLFVDVAIQDGWQDDLEASANW
QSTIVLLEDGVESDDGATESEPTGETDTGLSAFADGSSPATSTESATENEAQDGEEVEFT
GVVVQARDPVILDDGERTVTLRTEVDAELGEELTVRGELADGTLDPDAVE
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgggcgatatcgagacgatctacgaggatctcgacacggaggaggtctccctcgaggag
ttccgggcggccgtcgagtccaaagtcgagcagatgggcgggctcgcggacgaggagacg
gccgcgatgctcatcgcccacgaactcgaagatgggcaggtatcgggactcgcggacgtc
gagcccgggatggacgaggtctcggtcaccgcgaaggtcatcaacgtcggggagttgcgg
accttcgagcgggacgatcccgaccagcccgagggccaggtgatcaacgccgacgtggcc
gacgagacgggccgactccgggtctcgttctgggacgagatggcgagtgcggccgaatcg
gacctcgaagcagggcaagtactcaacatcaacggccggccgaaggatggctacgacggc
gtggaggtcaccgtcgaccaggtcgaaccggcacccgacacggagatcgaggtcacgctc
accgaggagtaccgcgtctcggatctcacgctcggcgcgtcggatgtcaccctgctgggc
gaagtcctggcgaccgagcccgtccggaccttcgaccgggacgacggctcggaggggaag
gtctcgaacgtgctggtcggcgacgagacgggtcgggtccgggtcactctctgggacgac
caggccgaccaggccgaggccttcgagccccacgatgtcgtcgagatcatcgacggctac
gtccgagagcgggacggccgactggaactgcacgtgggcgaccggggcgccatcaatcga
actgacacagaggtgtcctacgtccccgacacgacggacatcgaggccgtcgaactcgac
gacaccgtcgacatctcgggggtcgtgcgctccgcggacccgaaacgcaccttcgaccgg
gacgacggctccgagggccaggtccggaacgtccgcgtgcaggacgagacagacgacatc
cgggtcgcactctggggcgagaaggcggacctggacctcggcccgggcgacgaggtgctg
ttcgtggacgtggcgatccaggacggctggcaggacgacctggaggcctccgcgaactgg
cagtccaccatcgtgttgctggaggacggggtcgagtccgatgacggggccaccgagagc
gagccaacgggcgaaaccgacaccgggctctcggccttcgccgacggctcctcaccagcc
acgagcaccgagtcggccaccgagaacgaggctcaggatggggaggaagtcgagttcacg
ggtgtggtcgtgcaggccagggacccggtcatcctggacgacggggaacggaccgtgacg
ctgcgaaccgaggttgacgccgaactcggcgaggaactgacagttcgtggggaactcgcg
gacggaacactcgatcccgacgccgtcgagtga

DBGET integrated database retrieval system