Halodesulfurarchaeum formicicum HTSR1: HTSR_1817
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Entry
HTSR_1817 CDS
T04517
Symbol
idsA2
Name
(GenBank) geranylgeranyl diphosphate synthase, type I
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh00900
Terpenoid backbone biosynthesis
halh01100
Metabolic pathways
halh01110
Biosynthesis of secondary metabolites
Module
halh_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HTSR_1817 (idsA2)
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
HTSR_1817 (idsA2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
halh01006
]
HTSR_1817 (idsA2)
Enzymes [BR:
halh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HTSR_1817 (idsA2)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HTSR_1817 (idsA2)
2.5.1.29 geranylgeranyl diphosphate synthase
HTSR_1817 (idsA2)
Prenyltransferases [BR:
halh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HTSR_1817 (idsA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF4075
Motif
Other DBs
NCBI-ProteinID:
AOW80983
UniProt:
A0A1D8S6K0
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All DBs
Position
1750326..1751204
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AA seq
292 aa
AA seq
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MEYVEARRDVIEERLREVVAAVEPTELEDELAHVVLAGGKRVRPTLTLLACEAAGGSVWS
SDSESLGPNGQTALDFAVGVELVHNASLVVDDIIDQSALRRGSESAWAAYGHGPAIVASD
GLLGEAFALFSADSRALESVSRALVELGEGEAVELVDQPSSESEYMELARRKTGALFRTA
AELGAIAADADAATIDALGEYAERVGIAFQIRDDVLDSVADAEDLGKPTGQDDTMDRPSI
VRVTGEDPETLTERARMESEAALAALDRVAVEDSEARQYLEDLATFVVDRDR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgtcgaggcgcgccgggacgtcatcgaggagcggcttcgcgaggtcgtcgcg
gcggtcgaaccgactgaactcgaagacgaactcgcacacgtcgtactcgcgggtgggaaa
cgggtgcgaccgacgctgacgctgctcgcctgcgaagccgccggcgggtcggtctggtcg
agcgattcggaatccctgggtccgaacggccagacggccctcgatttcgcggtgggcgtg
gaactcgtgcacaacgcctcgctggtggtcgatgacatcatcgaccagtccgcccttcgc
cgcgggagcgagagtgcctgggcggcctacggacatggcccggccatcgtcgcgagcgac
ggcctgctcggggaggcgttcgcactcttttcggcggactcccgggccctggagtcggtc
tcccgggctctggtggaactcggcgagggcgaggccgtcgaactggtcgatcagccgagt
tcggaatccgagtacatggaactggcccggcgaaagacgggcgcgctcttccggacggcc
gcggaactcggcgcgatcgccgccgacgccgacgcggccacgatcgacgccctcggcgag
tacgccgagcgagtggggattgccttccagatccgggacgacgtgctggattcggtggcc
gacgccgaggacctggggaagccgactggacaggacgacaccatggaccgcccgtcgatc
gtcagagtgaccggcgaggacccggagacactgaccgaacgggcccgcatggagtcggaa
gccgccctcgctgcgctcgaccgggtcgcagtcgaggacagcgaggcccgccagtacctc
gaagacctcgcgacgttcgtggtcgaccgggaccgctag
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